TCONS_00010388-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010388-protein
Unique NameTCONS_00010388-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010388-protein ID=TCONS_00010388-protein|Name=TCONS_00010388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
HFLGTGSAFPSPKRCSSCTAVRLDSGSVWLFDCGEGGQIQIQKSKIRPAK
ISAVFITHLHGDHMFGLPGMMCTISQAVEGQHLDVYGPMGLKNFLRCSLS
LSFSNLSYSFTVHEIKLPDIQEFRQNCDIEIDSEYWQKLSDFSKREFPPH
PNEVDTNHIIEKNEEGFYHVCYMDRFNVYAADIKHTVPCLGYVLCEDNLP
GKLDVTILKRKGVPAGPLYGKIKNGESITLDDGTVISPNDCLGPDRPGRK
IVHLGDTHDPSAIGDLARGATILIHEATNENADFEKCLAHGHSTAGMAGK
FACTIEAQKLILTHFSQRYSEEETNTILVQEAKETFGSDNVLAAADLMVV
PVLFPR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005839XLOC_005839Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010388TCONS_00010388Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR013471RNase_Z/BN
Vocabulary: Molecular Function
TermDefinition
GO:0016891endoribonuclease activity, producing 5'-phosphomonoesters
Vocabulary: Biological Process
TermDefinition
GO:0042779tRNA 3'-trailer cleavage
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042779 tRNA 3'-trailer cleavage
molecular_function GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 1..354
e-value: 3.5E-59
score: 199.8
IPR001279Metallo-beta-lactamasePFAMPF00753Lactamase_Bcoord: 16..70
e-value: 2.4E-9
score: 37.4
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 1..119
coord: 170..352
IPR013471Ribonuclease Z/BNHAMAPMF_01818RNase_Z_BNcoord: 1..352
score: 32.592

Blast
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BLAST of TCONS_00010388-protein vs. Swiss-Prot (Human)
Match: RNZ1 (Zinc phosphodiesterase ELAC protein 1 OS=Homo sapiens GN=ELAC1 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 1.290e-82
Identity = 148/367 (40.33%), Postives = 213/367 (58.04%), Query Frame = 0 
Query:    2 FLGTGSAFPSPKRCSSCTAVRLDSGSVWLFDCGEGGQIQIQKSKIRPAKISAVFITHLHGDHMFGLPGMMCTIS----QAVEGQHLDVYGPMGLKNFLRCSLSLSFSNLSYSFTVHEIKLPDIQEFRQNCDIEIDSEYWQKLSDFSKREFPPHPNEVDTNHIIEKNEEGFYHVCYMDRFNVYAADIKHTVPCLGYVLCEDNLPGKLDVTILKRKGVPAGPLYGKIKNGESITLDDGTVISPNDCLGPDRPGRKIVHLGDTHDPSAIGD----LARGATILIHEATNENADFEKCLAHGHSTAGMAGKFACTIEAQKLILTHFSQRYS------EEETNTI--LVQEAKETFGSDNVLAAADLMVVPV 352
            FLGTG+A+PSP R +S   +R + G  WLFDCGEG Q Q+ KS+++  +I+ +FITHLHGDH FGLPG++CTIS      V  Q +++YGP+GL++F+  ++ LS + L + + VHE+ +P           +  +E  ++ +  ++ + PP   +  T  I+  +EE  Y +   ++F V A  + H +P  G+ + E   PGKL+   LK  GVP GP YGK+KNG S+ L++G  ISP D L     GRKI  LGD      +GD    L   A +LIHEAT ++A  +K   HGHST  MA  FA    A++L+LTHFSQRY       E ET+ I  L ++A+       V  A D MV+ +
Sbjct:    7 FLGTGAAYPSPTRGASAVVLRCE-GECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHEL-VPTAD--------QCPAEELKEFAHVNRADSPPKEEQGRT--ILLDSEENSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCS--GVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISI 359
The following BLAST results are available for this feature:
BLAST of TCONS_00010388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNZ11.290e-8240.33Zinc phosphodiesterase ELAC protein 1 OS=Homo sapi... [more]
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