TCONS_00009974-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009974-protein
Unique Name	TCONS_00009974-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	601

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009974-protein ID=TCONS_00009974-protein|Name=TCONS_00009974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=601bp
MERPTKKPCSFFEEYQRTSLLQNAFPLPYVMAHKEDNALYLNADRIRDNE
WKSILTALRKDATLKYITISSAWQKPSHGGLEKFSSQKKKLPIRTRSLNS
QLSRVLKDVLIGNPCLECLVLQNILLREEDIYILSKALPKVTTLKFLSFE
QCPVRDKGFNHLMEGIRKAKTISSINFTKCALTWKSMEALASVIKYQSSQ
RHEVAWQASLRYRKPDLDQMHGLRRVALCQNKLGDEGGRILADALKDDIW
LKALDLQQCGLSDDSATILMETLKWNKNLVVLDIRRNSFISYQNLRSLIE
MVMVNAGGESSEYPWMKASEEIKSDTTFNKRSSTMVNKKQKRNGRRKSLE
SKRSKDHVPWRMAERVRSRYSNTDVAHSNAPYFTQKSAAGLSPPRDTDHP
LYEWSDRRKEKAKRRKRVQKDLKEVLEVLEVEECIDEEDEIESESEEAPP
EAHPQLSASHEEQAASDYLQTIEQLREELDDFRAELDEERSKRRKAEQRI
EKLKHEKQVLKHTVEFYKHQSMVMEEEKQSAKKTSLNFKLPDLSPQDLLE
NENALASIESSFQQFQKFLDMLKNLGLDDVCQQFDQQPTSYQQQRQQDEK
S

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005601	XLOC_005601	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009974	TCONS_00009974	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026212	Cep78

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 458..520
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 220..247 e-value: 0.052 score: 22.7 coord: 251..275 e-value: 35.0 score: 6.3 coord: 141..168 e-value: 150.0 score: 1.7 coord: 113..140 e-value: 23.0 score: 7.5
None	No IPR available	GENE3D	3.40.50.10480		coord: 216..309 e-value: 7.0E-13 score: 48.0 coord: 83..207 e-value: 5.1E-12 score: 45.2
None	No IPR available	GENE3D	1.20.5.1000		coord: 465..535 e-value: 0.0046 score: 16.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..463
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 39..306
IPR026212	Centrosomal protein of 78kDa	PRINTS	PR02062	CENTROSOME78	coord: 159..180 score: 16.53 coord: 243..262 score: 53.18 coord: 206..224 score: 59.81 coord: 182..197 score: 42.61

Blast

[Close]

BLAST of TCONS_00009974-protein vs. Swiss-Prot (Human)
Match: CEP78 (Centrosomal protein of 78 kDa OS=Homo sapiens GN=CEP78 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.417e-83
Identity = 196/597 (32.83%), Postives = 294/597 (49.25%), Query Frame = 0

Query:   11 FFEEYQRTSLLQNAFPLPYVMAHKEDNALYLNADRIRDNEWKSILTALRKDATLKYITISS---AWQKPSHGGLEKFSSQKKKLP-IRTRSLNSQLSRVLKDVLIGNPCLECLVLQNILLREEDIYILSKALPKVTTLKFLSFEQCPVRDKGFNHLMEGIRKAKTISSINFTKCALTWKSMEALASVIKYQSSQRHEVAWQASLRYRKPDLDQMHGLRRVAL-CQNKLGDEGGRILADALKDDIWLKALDLQQCGLSDDSATILMETLKWNKNLVVLDIRRNSFISYQNLRSLIEMVMVNAGGESSEYPWMKASEEIK--SDTTFNKRSSTMVNKKQKRNGR-RKSLESKRSKDHVPWRMAERVRSRYSNTDVAHSNAPYFTQKSAAGLSPPRDTDHPLYEWSDRRKEKAKRRKRV-------------QKDLKEVLEVLEVEECIDEEDEIESESEEAPPEAHPQLSASHEEQAASDYL-QTIEQLREELDDFRAELDEERSKRRKAEQRIEKLKHEKQVLKHTVEFYKHQSMVMEEEKQSAKKTSLNFKLPD-LSPQDL----LENENALASIESSFQQFQKFLDMLKNLGLDDV 580
            FF  Y+    LQN+ PLP V A   +  L  NADR+R  +W  +L+ L+ +  L  ++I S    W   +   + KF   + ++P IR + +  QL + LK  L  +  L+ L L  ++LRE D+ IL+K L K  +L  LS   CP+ D G   + +GI+ + T+ ++NFT C LTW+  + +A ++KYQ+ +RHE  W  SLRYR+PDLD M GLRR+ L C   +GD G    AD+L +D+WL+ALDLQQCGL+++ A  L+E L+ N  LVVLDIR+N  I +  ++++I+ V+ N     SEY W+  S  +K  S T   KR + ++    K     R  L +K+            V S   ++      AP       +G  P          W  R  E+AKR +               Q      + V        EE +  SES    PE       S E++A  + L + ++QL+E           ER  R K ++R+ +L+HE   L++                       +NF L + L  Q L    L++E  L SIE+SFQ+F  FLD+LK+ GL  +
Sbjct:   15 FFSHYEYLCALQNSVPLPAVRACLREGVLDFNADRLRGVDWAPLLSTLKINKDLPLVSIKSFFQPWLGDTGSDMNKFC--RSRVPAIRYKDVTFQLCKALKGCLSISSVLKNLELNGLILRERDLTILAKGLNKSASLVHLSLANCPIGDGGLEIICQGIKSSITLKTVNFTGCNLTWQGADHMAKILKYQTMRRHEETWAESLRYRRPDLDCMAGLRRITLNCNTLIGDLGACAFADSLSEDLWLRALDLQQCGLTNEGAKALLEALETNTTLVVLDIRKNPLIDHSMMKAVIKKVLQNGRSAKSEYQWI-TSPSVKEPSKTAKQKRRTIILGSGHKGKATIRIGLATKKP-----------VSSGRKHSLGKEYYAPAPLPPGVSGFLP----------W--RTAERAKRHRGFPLIKTRDICNQLQQPGFPVTVTVESPSSSEVEEVDDSSESVHEVPE-----KTSIEQEALQEKLEECLKQLKE-----------ERVIRLKVDKRVSELEHENAQLRN-----------------------INFSLSEALHAQSLTNMILDDEGVLGSIENSFQKFHAFLDLLKDAGLGQL 546

The following BLAST results are available for this feature:

BLAST of TCONS_00009974-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009974-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CEP78	1.417e-83	32.83	Centrosomal protein of 78 kDa OS=Homo sapiens GN=C...	[more]

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TCONS_00009974-protein (polypeptide) - C. hemisphaerica