TCONS_00009323-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009323-protein
Unique Name	TCONS_00009323-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	671

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009323-protein ID=TCONS_00009323-protein|Name=TCONS_00009323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
KNEDIFTDVLKIFANSKPNAFSSSIFKLEDCNGEFARLSNRVPANVFSSQ
AQVQTESIPKALEKYFVTGKALIETETIMKNLDLIMKVADNPLNLLLEGE
TGIGKTAVISEAARRLGVPLIRLNLSSSTSIMSLFGSAFPTKVEGKMRVE
FKEGPFTLAFKLGAWLLLDEFNLAPDNVLSSIESALDTSILILSTDSIEG
SEHAEKKYLEIQKHDNFRLFCTQNPSTGLFKGKREVHSSSLLSRFTPVVI
NAPKKNEIKEIVLRILNANCSFQIDHSKMAANITDLHTEISSILTKIDES
QNAYTKVTLRDAIDFTNKASYILGLKGGRYSESKSMIGKAAYSVYASRLR
KVENQETIKNAIQRILQIQIDMKNYNLISGTELKGYISSQNMKPSFYLED
KRNSVAFSNQLYQSILEELIPKHLNEKEVLNIGYDLYQWTISTMLSNLDL
NEKLEAILKKYQSLVNSNSEKTLIKDVIGQSMAGNFQIPDVKSEVGSFQG
TKAITEEMQECWKEMIDAVHFKQPVLLTGDSGCGKSTTIDVLARLCGKKV
IHLYVTPETESEALVGQNEPDKEKVVAWSDGIVTKAYKEGYWLVIENISE
AQSTVLERLNSVLETPPQWLTTENVGLKEEEVNQNPADDFRVFATMTPPR
SKLSEHLXYQQSFVYFGIERW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005215	XLOC_005215	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009323	TCONS_00009323	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003593	AAA+_ATPase
IPR011704	ATPase_dyneun-rel_AAA
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016887	ATPase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 521..663 e-value: 0.25 score: 19.6 coord: 91..256 e-value: 7.2E-5 score: 32.2
None	No IPR available	GENE3D	3.40.50.300		coord: 78..250 e-value: 1.8E-25 score: 88.5
None	No IPR available	GENE3D	3.40.50.300		coord: 512..666 e-value: 1.3E-25 score: 89.1
None	No IPR available	CDD	cd00009	AAA	coord: 92..188 e-value: 6.5564E-6 score: 44.0591
None	No IPR available	CDD	cd00267	ABC_ATPase	coord: 525..545 e-value: 0.00326745 score: 36.4539
IPR011704	ATPase, dynein-related, AAA domain	PFAM	PF07728	AAA_5	coord: 94..245 e-value: 3.2E-13 score: 49.7 coord: 524..654 e-value: 5.0E-19 score: 68.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 510..650
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 68..272

Blast

[Close]

BLAST of TCONS_00009323-protein vs. Swiss-Prot (Human)
Match: MDN1 (Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.701e-20
Identity = 94/338 (27.81%), Postives = 157/338 (46.45%), Query Frame = 0

Query:   42 VPANVFSSQAQVQTESIPKA-----LEKYFVT--------GKALIETETIMKNL-DLIMKVADNPLNLLLEGETGIGKTAVISEAARRLGVPLIRLNLSSSTSIMSLFGSAFPTKVEGKMRVEFKEGPFTLAFKLGAWLLLDEFNLAPDNVLSSIESALDTSILILSTDSIEGSEHAEKKYLEIQKHDNFRLFCTQNPSTGLFKGKREVHSSSLLSRFTPVVINAPKKNEIKEIVLRILNANCSFQIDH-SKMAANITDLHTEISSILTKIDESQNAYTKVTLRDAIDFTNKASYILGLKGGRYSESKSMIGKAAYSVYASRLRKVENQETIKNAIQR 364
            VP NV S   Q   E  PK      +E Y++          +  I T ++  NL D++  V+     +L++GET +GKT++I   A   G   +R+N    T I    G  + +   GK+   FKEG    A + G W++LDE NLAP +VL ++   LD +  +L T++ E           ++ H  F LF TQNP  GL+ G R+V S +  +RF  +  +    +E++     IL+  CS    + SK+   + DL +   S  + +   +  +  +TLRD   +  +  Y L     +  +    +    Y + A R+RK E  + I+  +++
Sbjct: 1015 VPGNVKSLLKQPIPE--PKGGRLIQVEGYWIAVGDKEPTIDETYILTSSVKLNLRDIVRVVSAGTYPVLIQGETSVGKTSLIQWLAAATGNHCVRINNHEHTDIQEYIG-CYTSDSSGKLV--FKEGVLIDAMRKGYWIILDELNLAPTDVLEALNRLLDDNRELLVTETQE----------VVKAHPRFMLFATQNPP-GLY-GGRKVLSRAFRNRFVELHFDELPSSELET----ILHKRCSLPPSYCSKLVKVMLDLQSYRRS--SSVFAGKQGF--ITLRDLFRWAER--YRLAEPTEKEYDWLQHLANDGYMLLAGRVRKQEEIDVIQEVLEK 1325

HSP 2 Score: 88.1965 bits (217), Expect = 9.067e-18
Identity = 65/201 (32.34%), Postives = 99/201 (49.25%), Query Frame = 0

Query:   58 IPKA--LEKYFVTGKALIETETIMKNLDLIMKVADNPLNLLLEGETGIGKTAVISEAARRLGVPLIRLNLSSSTSIMSLFGSAFPTKVEGKMRVEF--KEGPFTLAFKLGAWLLLDEFNLAPDNVLSSIESALDTSILILSTDSIEGSEHAEKKYLEIQ-KHDNFRLFCTQNPSTGLFK--GKREVHSSSLLSRFTPVVIN 251
            IP+   L +  +   AL    T M N   +++       +LLEG  G+GKT+++   A+  G  L+R+NLS  T I  LFG+  P  VEG    EF  ++GP   A K G W++LDE NLA  +VL  + +  D            G  +  +  +  Q +H+  ++F  QNP    F+  G R+    S L+RFT V ++
Sbjct: 1711 IPRGPVLHRNNIADYALSAGTTAM-NAQRLLRATKLKKPILLEGSPGVGKTSLVGALAKASGNTLVRINLSEQTDITDLFGADLP--VEGGKGGEFAWRDGPLLAALKAGHWVVLDELNLASQSVLEGLNACFDH----------RGEIYVPELGMSFQVQHEKTKIFGCQNP----FRQGGGRKGLPRSFLNRFTQVFVD 1894

The following BLAST results are available for this feature:

BLAST of TCONS_00009323-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009323-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MDN1	1.701e-20	27.81	Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2	[more]

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TCONS_00009323-protein (polypeptide) - C. hemisphaerica