TCONS_00009153-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009153-protein
Unique NameTCONS_00009153-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009153-protein ID=TCONS_00009153-protein|Name=TCONS_00009153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MWKIVAVFCLYVQMTYGAVNELTDNDFYSYAAKKQVLLVNFYAPWCSDCA
NLNPHFEGAATTLGPRGADLAKVDCFGAGKGMCEMYSVKSWPQLKSFHFG
TYNGDYTGPQTTDGIANYINTVENSAAPQVAPEQPAGNPYAGHLPGAAQP
AAGFNKQPVATSLSCAKCKIEKPKGKINKGCTSALKKQCITSSKDKKSLS
KAQMQYGEDDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005128XLOC_005128Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009153TCONS_00009153Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 19..120
e-value: 1.0E-17
score: 63.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..124
score: 10.371
NoneNo IPR availableGENE3D3.40.30.10coord: 13..205
e-value: 5.3E-22
score: 77.9
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 19..120
e-value: 3.1E-21
score: 70.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..211
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 21..119
e-value: 2.02276E-23
score: 89.5921
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 14..122

Blast
[Close]
BLAST of TCONS_00009153-protein vs. Swiss-Prot (Human)
Match: PDIA3 (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 79.337 bits (194), Expect = 2.578e-17
Identity = 46/105 (43.81%), Postives = 59/105 (56.19%), Query Frame = 0 
Query:   19 VNELTDNDFYSYAAKKQ---VLLVNFYAPWCSDCANLNPHFEGAATTLGPRG-ADLAKVDCFGAGKGMCEMYSVKSWPQLKSFHFGTYNGDYTGPQTTDGIANYI 119
            V ELTD++F S  +      ++LV F+APWC  C  L P +E AAT L  +G   LAKVDC  A    C  Y V  +P LK F  G   G Y GP+T DGI +++
Sbjct:   27 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL--KGIVPLAKVDC-TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL 128
The following BLAST results are available for this feature:
BLAST of TCONS_00009153-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIA32.578e-1743.81Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
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