TCONS_00008901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008901-protein
Unique NameTCONS_00008901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008901-protein ID=TCONS_00008901-protein|Name=TCONS_00008901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MFAMLFFTVIILMCTFGVCFSIDFSSVAPGDSLFFKSRIEGEIINANSSS
WEKIIPLSSEPQCRSKCHHSTQCRSAAFYPTDNICKFRDVNRLSPNGVFV
QKAGIKVYDKRTAPITPVIIKTVENATDCKDVMNQGHKRSGVYMVSTDVQ
KYVPILCDMDTAGGGWTVIQQRVDGSIPFNRTWNSYKFGFGDFSTNFWFG
NDRIHNLTTHYGNDNDIIFDLTKHDGTKTNAGYRNFYIDGESDKYRLHVN
SRYDPDLPDSSYADVTFTQGFGLHDGKIFYTIDADSSLSCSEEKGGSGWW
FANCYKIHLNGIYGLQGSDAGIVWDKVTFIVPSSGGNKVQHPFIKTRMLV
RRNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004983XLOC_004983Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008901TCONS_00008901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR003609Pan_app
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 124..353
e-value: 8.4E-42
score: 154.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 127..326
e-value: 1.1E-50
score: 172.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 120..354
score: 38.548
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 125..328
IPR003609PAN/Apple domainPFAMPF00024PAN_1coord: 52..95
e-value: 3.9E-6
score: 26.6
NoneNo IPR availableGENE3D3.50.4.10coord: 29..113
e-value: 2.2E-8
score: 33.5
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 41..111
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 120..264
e-value: 6.0E-44
score: 148.9
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 267..329
e-value: 6.3E-11
score: 41.7

Blast
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BLAST of TCONS_00008901-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.289e-43
Identity = 84/245 (34.29%), Postives = 134/245 (54.69%), Query Frame = 0 
Query:  114 PITPV-IIKTVENATDCKDVMNQGHKRSGVYMVSTDVQKYVPILCDMDTAGGGWTVIQQRVDGSIPFNRTWNSYKFGFGDFSTNFWFGNDRIHNLTTHYGNDNDIIFDLTKHDGTKTNAGYRNFYIDGESDKYRLHVNSRYDPDLPDSSYADVTFTQGFGLHDGKIFYTIDAD---SSLSCSEEKGGSGWWFANCYKIHLNGIYGLQGSDA---GIVWDKVTFIVPSSGGNKVQHPFIKTRMLVR 351
            P  PV +++  E   +C+++++QG   SG Y +     + +P+ CDMDT GGGW V Q+R DGS+ F R+W+SY+ GFG+  + FW GN+ +H LT     + ++  +L   +G +T A Y  F + GE D Y+L +            +++ T      LH G+ F T DAD   S+ +C+    G+ WW+A+CY+ +LNG Y +  + A   GI W         + G  V HP+ + RM++R
Sbjct:   77 PGDPVNLLRCQEGPRNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQ--GNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALG----------KFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGA-WWYASCYRSNLNGRYAVSEAAAHKYGIDW---------ASGRGVGHPYRRVRMMLR 299
The following BLAST results are available for this feature:
BLAST of TCONS_00008901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN39.289e-4334.29Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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