TCONS_00008846-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008846-protein
Unique Name	TCONS_00008846-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	937

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008846-protein ID=TCONS_00008846-protein|Name=TCONS_00008846-protein|organism=Clytia hemisphaerica|type=polypeptide|length=937bp
MDEEERNRKPSKLLSLVEERQGRYSQPLLTKNHNVIITPPVLLPGETLIL
QQDKVTCVNTLWRAATGALHLTNYRIIFTGEFMQKFNSSILVMDDNRLSK
LGYRYQEKKTMLQHVSNSIRERLPGKSKSLKVLRKSKNDEVKWTSNKLLP
RHSLTPDSIHVINNESSPKNFRKNARNKFTGDNEVIITLPILSLLDIRKF
PKQHLGTEKLQMLNDGIEIITTNFLSVKLCLGEEQSYDADELLLRLLKHT
KVKSSNIFAYVHKGNIPSSFKTVEERNTSNVYTLDRECERLGMDTLTDWK
KSEQCTCPSYPKQVFLPKMAVNNEDALGKWSKYYQDNCYPLLVWRNAQSK
ALLLRSSVSLMSRGNKDNRCIVDEDIIKSVSNECPNLRKLIIYTDSKTAL
CINGSFFKVKEPLFYPNCELEIWDNLPDILATQQSATRLYQVLEKSDDLQ
YMKCVEETGYLQELNFLLDYALCVVNTLNFNHVLLSIGSGVERAAQLSSL
VQLIMDPFYRTMDGFQILLQKEWCSIAFPFKKRNLVDFSSEEDLSPLFLQ
FLDCVWQLTQQYPLSFEFSESLLEMLAEHSYSGRFGTFLNEEKETDENTP
GSTLSIWSYIQLKISVSDHLLNYNYDQHHNRGVLQPRIGIPHLQIWSWFN
RYRRDKTLYVSSMLETMELEKLQKEYQELLEKHTSLLSSLSDIDAASNVS
SFNSRLCHSPDLISKDSPDSPQFGLFNEALGNKAQSIENLIAVDSESLHS
DEFDIIDPIPKTEITKCGQSSFYSAVKEDSMCAMDLLKELKKEELPQDWK
STERFHSLDDYLISEGIQSSDVKEVEISKMMCSGYLTKKGANYRTWRRRW
FQIDFNKKFVGYYEDETACSQSINPKGAFSYMGIQSVYVDDANNKNDKYT
FILRTFDRTYYIRAPSEKAMNLWMTCFSIPVSCLAPT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004965	XLOC_004965	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008846	TCONS_00008846	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH_dom-like
IPR010569	Myotubularin-like_Pase_dom
IPR029021	Prot-tyrosine_phosphatase-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 662..689
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 830..934 e-value: 2.5E-13 score: 60.3
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 831..928 e-value: 1.3E-13 score: 51.3
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 829..932 score: 14.8
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 819..929 e-value: 1.4E-19 score: 69.6
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 47..250 e-value: 4.9E-6 score: 26.0
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 829..928
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 40..81
IPR010569	Myotubularin-like phosphatase domain	PFAM	PF06602	Myotub-related	coord: 274..592 e-value: 5.7E-69 score: 232.6
IPR010569	Myotubularin-like phosphatase domain	PROSITE	PS51339	PPASE_MYOTUBULARIN	coord: 278..650 score: 55.48
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 278..648

Blast

[Close]

BLAST of TCONS_00008846-protein vs. Swiss-Prot (Human)
Match: MTMR1 (Myotubularin-related protein 1 OS=Homo sapiens GN=MTMR1 PE=1 SV=4)

HSP 1 Score: 184.111 bits (466), Expect = 1.161e-48
Identity = 142/490 (28.98%), Postives = 244/490 (49.80%), Query Frame = 0

Query:  182 DNEVIITLPILSLLDIRKFPKQHLGTEKLQMLNDGIEIITTNFLSVKLCLGEEQSYDADELLLRLLKHTKVKSSN--IFAYVHKGNIPSSFKTVEERNTSNVYTLDRECERLGMDTLTDWKKSEQCT----CPSYPKQVFLPKMAVNNEDALGKWSKYYQDNCYPLLVWRNAQSKALLLRSSVSLMSRGNKDNRCIVDEDIIKSVSNECPNLRKLIIYTDSKTALC----INGSFFKVKEPLFYPNCELEIWDNLPDILATQQSATRLYQVLEKS-DDLQYMKCVEETGYLQELNFLLDYALCVVNTLNFNH--VLLSIGSGVERAAQLSSLVQLIMDPFYRTMDGFQILLQKEWCSIAFPFKKR--NLVDFSSEEDLSPLFLQFLDCVWQLTQQYPLSFEFSESLLEMLAEHSYSGRFGTFL--NEEKETDENTPGSTLSIWSYIQLKISVSDHLLNYNYDQHHNRGVLQPRIGIPHLQIWSWFNRYRR 654
            D   I+ +P+  +  + K   Q  G         GIEI+  +  +++L   +E+      +   L KH    S+   +FA+ +K   P         N   VY    E +R G+     WK S+  +    C +YP  + +P      +D L K + +      P+L W + +S+A + R S  L+  G  D RC  DE  ++++ +      KLII+   + ++       G  ++ +    YPN EL ++  + +I   ++S  +L +++  S D+ +++  V+ T +L+ +  LL  A+ + + +      V++    G +R AQL+SL  L++D +YRT+ GF+ L++KEW S    F  R  +  D  ++ D SP+FLQF+DCVWQ+T+Q+P +FEF+E  L  + +H YS  FGTFL   E++   E+    T+S+WSYI  ++    +    NY+ H    VL P   + HL++  W N Y R
Sbjct:  142 DPHFILDVPLGVISRVEKIGAQSHGDNSC-----GIEIVCKDMRNLRLAYKQEEQSKLG-IFENLNKHAFPLSNGQALFAFSYKEKFPI--------NGWKVYDPVSEYKRQGLPN-ESWKISKINSNYEFCDTYPAIIVVPTSV--KDDDLSKVAAFRAKGRVPVLSWIHPESQATITRCSQPLV--GPNDKRCKEDEKYLQTIMDANAQSHKLIIFDARQNSVADTNKTKGGGYESESA--YPNAEL-VFLEIHNIHVMRESLRKLKEIVYPSIDEARWLSNVDGTHWLEYIRMLLAGAVRIADKIESGKTSVVVHCSDGWDRTAQLTSLAMLMLDSYYRTIKGFETLVEKEWISFGHRFALRVGHGNDNHADADRSPIFLQFVDCVWQMTRQFPSAFEFNELFLITILDHLYSCLFGTFLCNCEQQRFKEDVYTKTISLWSYINSQLDEFSNPFFVNYENH----VLYPVASLSHLEL--WVNYYVR 603

The following BLAST results are available for this feature:

BLAST of TCONS_00008846-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008846-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MTMR1	1.161e-48	28.98	Myotubularin-related protein 1 OS=Homo sapiens GN=...	[more]

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TCONS_00008846-protein (polypeptide) - C. hemisphaerica