Myophilin protein (polypeptide) - C. hemisphaerica

Overview
NameMyophilin protein
Unique NameTCONS_00008380-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008380-protein ID=TCONS_00008380-protein|Name=Myophilin protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
MANRPVGYGFTAETTKRIDDKYDAESEREAIDWINAVLGGQEVSYGKDNV
QHALKDGVILCKVMNILQPGIIGKIHPAESNSFKKMENIANFLTAAEKYG
CHRGDLFQSVYLTDGQNMPAVIGGIHAIGRKAQTNGFKGPLLGPKESSAN
PREFSEEQLLHGRVHGY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004708XLOC_004708Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008380TCONS_00008380Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 84..100
score: 55.36
coord: 50..65
score: 54.78
coord: 100..115
score: 33.46
coord: 3..17
score: 33.73
coord: 22..35
score: 42.86
coord: 121..135
score: 29.02
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..128
e-value: 3.5E-16
score: 69.8
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 14..164
e-value: 1.2E-32
score: 112.1
IPR001715Calponin homology domainPFAMPF00307CHcoord: 25..133
e-value: 3.7E-21
score: 75.3
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..132
score: 15.537
IPR001715Calponin homology domainCDDcd00014CHcoord: 25..133
e-value: 4.5585E-24
score: 90.4479
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..162

Blast
[Close]
BLAST of Myophilin protein vs. Swiss-Prot (Human)
Match: TAGL2 (Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 4.289e-31
Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 0 
Query:    1 MANRPVGYGFTAETTKRIDDKYDAESEREAIDWINAVLGGQ--EVSYGKDNVQHALKDGVILCKVMNILQP---GIIGKIHPAESNSFKKMENIANFLTAAEKYGCHRGDLFQSVYLTDGQNMPAVIGGIHAIG--RKAQTNG-FKG-PLLGPKESSANPREFSEEQLLHGR 163
            MANR   YG + E  ++I+ +YDA+ E+  I WI             G++N Q+ LKDG +LC+++N L P     + KI  A + +FK+ME I+ FL AAE+YG +  D+FQ+V L +G+NM  V   +  +G    A+ +G F G P   PK+S  NPR FS+ QL  G+
Sbjct:    1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQ-ASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGK 171
The following BLAST results are available for this feature:
BLAST of Myophilin protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL24.289e-3139.53Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3[more]
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