TCONS_00008280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008280-protein
Unique NameTCONS_00008280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length564

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008280-protein ID=TCONS_00008280-protein|Name=TCONS_00008280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=564bp
FHRKTHNRNKMAASKLSQLFNRGKKQPKLRNQSSQGVDSSDDEGYQDPIQ
NCPTEPPTRIPIPSYPPPRPASPKNPVANRDDYADPWDSKGSRTMSSGGG
GAIPPPRSMDTYQDPFDSRKENVKSYDPSGMSSSREDYADPFDTKFNNEK
TKAQQKQAPTHSVPDEEEADYDEPYEQKPSLNDTYEDPWDTRRSIDLTES
FTASTKPKPVPPPASQNIKINNKRDDYSDPWDSKLSASLTTEESYDDTYS
EPYDKGKTTIMDEKSKKKPSTSTKDDDDDDDDIYDMPYEEKEMIGIAKPQ
QNQGIQNFRSASVSSTKPEPQRVAPKPPLPYSGTVTSPTVPPPSQLQQPT
TSPQQPAPGGGDYDSPWEWRVPKVEQEFKRFSIGGADKKPAAPVAAPRGG
PAGKRPGAAPPPPINQNINPVPKPQRTNPPPKPPQPTNITEKEYEVDPTI
PLENQGWFHGHIRRGEAESLLHNQPDCSYLIRNSESSKLDFSLSLRNRGA
PMHLKISNRDGKYILGINSRPYDTIPEMIHHYAMHMLNIKGAEHVKLKYP
VFQENMYFTVEPGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004652XLOC_004652Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008280TCONS_00008280Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 457..471
score: 49.59
coord: 521..535
score: 20.91
coord: 488..499
score: 32.51
coord: 476..486
score: 41.36
IPR000980SH2 domainSMARTSM00252SH2_5coord: 455..538
e-value: 2.2E-24
score: 97.0
IPR000980SH2 domainGENE3D3.30.505.10coord: 439..557
e-value: 2.8E-26
score: 91.0
IPR000980SH2 domainPFAMPF00017SH2coord: 457..532
e-value: 3.6E-17
score: 62.1
IPR000980SH2 domainPROSITEPS50001SH2coord: 457..551
score: 19.629
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 444..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..440

Blast
[Close]
BLAST of TCONS_00008280-protein vs. Swiss-Prot (Human)
Match: SHB (SH2 domain-containing adapter protein B OS=Homo sapiens GN=SHB PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 6.823e-36
Identity = 105/330 (31.82%), Postives = 147/330 (44.55%), Query Frame = 0 
Query:  225 DDYSDPWDSKLSASLTTEESYDDTYSEPYDKGKTTIMDEKSKKKPSTSTKDDDDDDDDIYDMPYEEKEMIGIAKPQQNQGIQNFRSASVSSTKPEPQRVAPKPPLPYSGTVTSPTVPPPSQLQQPTTSPQQPAPGGGDYDSPWEWR---VPKVEQEFKRFSIGGADKKPAAPVAAPRGGPAGKRPGAAPPPPINQNINPVPKPQRTNPPPKPPQPTNITEKEYEVDPTIPLENQGWFHGHIRRGEAESLLHNQPDCSYLIRNSESSKLDFSLSLRNRGAPMHLKISNRDGKYILGINSRPYDTIPEMIHHYAMHMLNIKGAEHVKLKYPV 551
            DDYSDP+D+K        +     Y EPY+  +  IM E  +++   S          +YD PYE                            PE Q V        S +  SP +       + +  PQ       +YD PWEW    +P +  +F      G +K+ ++P                   P       +  P     P K   P         VDP +PLE Q W+HG I RG+AE+LL    +CSYL+RNS++SK D+SLSLR+    MH+K++    KY+LG NS P+D++PE+IH+Y    L IKGAEH+ L YPV
Sbjct:  244 DDYSDPFDAKNDLKSKAGKGESAGYMEPYEAQR--IMTEFQRQESVRS----QHKGIQLYDTPYE----------------------------PEGQSVDSD-----SESTVSPRL-------RESKLPQDDDRPADEYDQPWEWNRVTIPALAAQFN-----GNEKRQSSP------------------SPSRDRRRQLRAPGGGFKPIKHGSPEFCGILGERVDPAVPLEKQIWYHGAISRGDAENLLRLCKECSYLVRNSQTSKHDYSLSLRSNQGFMHMKLAKTKEKYVLGQNSPPFDSVPEVIHYYTTRKLPIKGAEHLSLLYPV 504
The following BLAST results are available for this feature:
BLAST of TCONS_00008280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SHB6.823e-3631.82SH2 domain-containing adapter protein B OS=Homo sa... [more]
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