Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008171-protein ID=TCONS_00008171-protein|Name=TCONS_00008171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1039bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00008171-protein vs. Swiss-Prot (Human)
Match: TRPA1 (Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=1 SV=3) HSP 1 Score: 346.665 bits (888), Expect = 2.615e-102 Identity = 274/961 (28.51%), Postives = 457/961 (47.55%), Query Frame = 0 Query: 11 LLNVKTIDIEAKDRTQMTALHSAASNGSYEVCDLLLQHGADIRCRDEEDMTPLHFASMEGHVDIVELLFDVGEKQGGYTMLAKMIMDQDRDDQTALHLAVENGHCDIVKLCISKGANVNFVKTNMNTPLHIACTSGEEGIVQTLVESEAD----IEAKNVLQETPLHRAALFNRINIVRYLLDRDAEIDCRDKDKKTPLMNAVRKDNVETVKLLLQRGADIKVKDAADKTSLYVAAEEDCWDVINI---IRKIPQSSSLLEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNIVNDEDDASNTPLHLAALEGHENVLSILLEKGAA-VDARNAMLWTPLDCAASRGWTWCAENLLDAD-SLIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVITRKDHLGRNCLDWAIENNQRDAALAILDCEQWKNALR--NCTAEGNKVTTPMRKLIKKLPDVAEKVFDKCIKGNGLPVEHPQYEISCSYEFLEDSFTEWGPSVFDFKALEIKKQHVVHNANSNVTMDTQKKSYCHMIGRKLHLPGYVKKQTERKRNHPLKFMVQNERTKLLCHPLVTYLLRHKWRSLGRYFYYSKLFLYIIYLFFLTGFALNIITDKYECLNSNSTLSSNTTTPNSSGQTSYDKNVISAAQFAPYGDCICVQVFNVLYENKPSAKSRQFFVGYGKHIVLFL-AVFSLIIEFAKLISQLHQYFLP-HCVVEFTSYILSILYVIESFAYNGAPIEIMSRCTDWQRSLGAITVWLSWINLVLFMRKFPKLGIYVVMFTDILKTFAQFFTVFALFVISFGLGFHMMLYEQRPRAFSTPLRAILKTTMGMLGEFEYDTVFNDDY--NPLP---TAWVIYVAYLIVCCIIVMNLLVGLAVDDIKGVQEQAALKRLAMQVDLTLDVEKALPLSIQNKLIKTEELIYPN 953 LL +TID+ + TA+ A + + E +LL+ GA ++ P+H A+ G + +E++ GE+ G L M+ + T LHLAV+NG +++K+C+ GA ++ V+ T +H A T G IV+ ++ S + + + ET LHRA+LF+ + YL+ A+I+ D + ++PL+ A + V LLL +GA + +KD + L++ ++ + + N+ ++ Q L+ + D + TPLH A +G +V LL I +K+ +PLH A+ YGR + LL++ ++N+ D TPLHLAA GH+ V+ +LL+KGA + N WT L A+ G+T + +LD + D D+ T LH A++EGH + LL+S A I + L A+ N +++ L I+ ++W L+ + + GNK P+ ++I+ LP+ + + D C+ H + SC ++E ++FK L+ + +V + L MVQN R +LL HP+ L KW + G + L Y + L +T +NI + NST N T+ +S + + +I C+ I++FL ++F E ++ Q YF+ V+E+ Y I++V+ F A ++ WQ GAI V+ W+N +L++++F GI++VM ILKT + VF +++FGL F+++L Q P FS+PL +I++T MLG+ Y F + Y N L ++ V++ I I++MNLL+GLAV DI VQ+ A+LKR+AMQV+L +EK LPL K+ + ++YPN Sbjct: 150 LLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGK--ATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQP-YGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNG--WTALHHASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQA-SFLHLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKC--PITEMIEYLPECMKVLLDFCML-------HSTEDKSCRDYYIE----------YNFKYLQCPLEFTKKTPTQDVIYEPLT---------------------------ALNAMVQNNRIELLNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPG----MAFNSTGIINETSDHSEILDTTNSYLIKT--------CM---------------------------ILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFVEIPAHLQ-------WQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNLQDP--FSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVYPN 1008 HSP 2 Score: 126.716 bits (317), Expect = 2.071e-29 Identity = 127/488 (26.02%), Postives = 199/488 (40.78%), Query Frame = 0 Query: 53 RCRDEEDMTPLHFASMEGHVDIVELLFDVGEKQGGYTMLAKMIMDQDRDDQTALHLAVENGHCDIVKLCISKGANVNFVKTNMNTPLH----------------------------------IACTSGEEGIVQTLVESEADIEAKNVLQETPLHRAALFNRINIVRYLL--------DRDAEIDCRDKDKKTPLMNAVRKDNVETVKLLLQRGADIKVKDAADKTSLYVAAEEDCWDVINI-IRKIPQSSSLLEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNI-----------------------------------VNDEDDASNTPLHLAALEGHENVLSILLEKGAAVDARNAMLWTPLDCAASRGWTWCAENLLDADS---LIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVITRKDHLGRNCLDWAIENNQRDAALAILD 459 RC D+ D LH+A+ EG ++++E + + +L +M D T LH AVE + VK +S+GAN N NM PLH IACT+ +Q L++ A N P+H+AA + +L R I+ + K TPL AV+ ++E +K+ L GA I + T+++ AA + +++ + I S ++ D T LH AS H + + L+S+G+ I+ + + +PL LA+ IV LLL + +I V DED+ TPLH A +G ++ LL ++ +++ +PL AAS G + LL S L++ D TPLHLA+K GH +++LL+ +K + DH G L A ILD Sbjct: 58 RC-DDMDTFFLHYAAAEGQIELMEKI----TRDSSLEVLHEM----DDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLL-KKGALFLSDHNGWTALHHASMGGYTQTMKVILD 535 HSP 3 Score: 89.7373 bits (221), Expect = 4.568e-18 Identity = 72/215 (33.49%), Postives = 105/215 (48.84%), Query Frame = 0 Query: 227 IKVKDAADKTSLYVAAEEDCWDVINIIRKIPQSSSL--LEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNIVNDEDDASNTPLHLAALEGHENVLSILLEKGAAVDARNAMLWTPLDCAASRGWTWCAENLL--------DADSLIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVI 431 +K D D L+ AA E I ++ KI + SSL L E D NTPLH A K I++V+ LLS G+ + +N + PLH+A + + ++++LLE VN E + NT + +A + L ILL+KGA N P+ AA G C E +L I+ + K TPLHLA + G ++MIK+ + A I Sbjct: 56 LKRCDDMDTFFLHYAAAEG---QIELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTID--VNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNGAQI 265 The following BLAST results are available for this feature:
BLAST of TCONS_00008171-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|