TCONS_00008171-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008171-protein
Unique NameTCONS_00008171-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1039

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008171-protein ID=TCONS_00008171-protein|Name=TCONS_00008171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1039bp
MRGNVTAARHLLNVKTIDIEAKDRTQMTALHSAASNGSYEVCDLLLQHGA
DIRCRDEEDMTPLHFASMEGHVDIVELLFDVGEKQGGYTMLAKMIMDQDR
DDQTALHLAVENGHCDIVKLCISKGANVNFVKTNMNTPLHIACTSGEEGI
VQTLVESEADIEAKNVLQETPLHRAALFNRINIVRYLLDRDAEIDCRDKD
KKTPLMNAVRKDNVETVKLLLQRGADIKVKDAADKTSLYVAAEEDCWDVI
NIIRKIPQSSSLLEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKN
DQNLTPLHLASKYGRSRIVRLLLEESGTHNIVNDEDDASNTPLHLAALEG
HENVLSILLEKGAAVDARNAMLWTPLDCAASRGWTWCAENLLDADSLIDP
TDKAKTTPLHLASKEGHVDMIKLLISRKAVITRKDHLGRNCLDWAIENNQ
RDAALAILDCEQWKNALRNCTAEGNKVTTPMRKLIKKLPDVAEKVFDKCI
KGNGLPVEHPQYEISCSYEFLEDSFTEWGPSVFDFKALEIKKQHVVHNAN
SNVTMDTQKKSYCHMIGRKLHLPGYVKKQTERKRNHPLKFMVQNERTKLL
CHPLVTYLLRHKWRSLGRYFYYSKLFLYIIYLFFLTGFALNIITDKYECL
NSNSTLSSNTTTPNSSGQTSYDKNVISAAQFAPYGDCICVQVFNVLYENK
PSAKSRQFFVGYGKHIVLFLAVFSLIIEFAKLISQLHQYFLPHCVVEFTS
YILSILYVIESFAYNGAPIEIMSRCTDWQRSLGAITVWLSWINLVLFMRK
FPKLGIYVVMFTDILKTFAQFFTVFALFVISFGLGFHMMLYEQRPRAFST
PLRAILKTTMGMLGEFEYDTVFNDDYNPLPTAWVIYVAYLIVCCIIVMNL
LVGLAVDDIKGVQEQAALKRLAMQVDLTLDVEKALPLSIQNKLIKTEELI
YPNIDKGWSFWSFWSVKSPTQALKSQVIRSHETTSGKNLDMRENMKNLRN
KMKTLEAQNNRIESMLNAIILHHDIKMPAEIAAHHSKSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004600XLOC_004600Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008171TCONS_00008171Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR005821Ion_trans_dom
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 988..1018
NoneNo IPR availablePFAMPF13637Ank_4coord: 27..78
e-value: 5.3E-14
score: 52.3
NoneNo IPR availableCDDcd00204ANKcoord: 98..221
e-value: 9.68858E-38
score: 137.9
NoneNo IPR availableCDDcd00204ANKcoord: 297..425
e-value: 3.10969E-32
score: 122.107
NoneNo IPR availableCDDcd00204ANKcoord: 21..155
e-value: 1.85715E-33
score: 125.574
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 59..74
score: 37.44
coord: 216..230
score: 42.35
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 25..54
e-value: 3.6E-5
score: 33.2
coord: 371..402
e-value: 2200.0
score: 2.5
coord: 437..466
e-value: 33.0
score: 13.4
coord: 134..163
e-value: 0.0031
score: 26.8
coord: 404..433
e-value: 4.9E-4
score: 29.4
coord: 101..130
e-value: 1.3E-6
score: 37.9
coord: 269..298
e-value: 0.0016
score: 27.7
coord: 167..196
e-value: 4.5E-4
score: 29.5
coord: 338..367
e-value: 1.2E-4
score: 31.4
coord: 200..229
e-value: 6.2E-5
score: 32.4
coord: 302..331
e-value: 0.0047
score: 26.2
coord: 58..87
e-value: 0.4
score: 19.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 269..301
score: 12.957
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 404..436
score: 11.781
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 58..82
score: 10.659
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 101..133
score: 12.583
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 134..166
score: 11.915
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 167..199
score: 11.861
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 200..232
score: 13.224
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 338..370
score: 14.158
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 302..334
score: 11.407
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 25..57
score: 12.77
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 716..916
e-value: 4.0E-8
score: 32.7
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 298..368
e-value: 1.7E-12
score: 47.7
coord: 169..231
e-value: 1.1E-13
score: 51.4
coord: 379..460
e-value: 1.7E-8
score: 34.8
coord: 99..165
e-value: 1.5E-12
score: 47.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 360..673
e-value: 1.7E-26
score: 92.6
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 89..163
e-value: 3.0E-23
score: 81.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 258..359
e-value: 1.4E-28
score: 99.0
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..85
e-value: 6.5E-23
score: 80.4
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 164..257
e-value: 1.7E-28
score: 98.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..458
score: 114.501
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 98..457
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 2..82

Blast
BLAST of TCONS_00008171-protein vs. Swiss-Prot (Human)
Match: TRPA1 (Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=1 SV=3)

HSP 1 Score: 346.665 bits (888), Expect = 2.615e-102
Identity = 274/961 (28.51%), Postives = 457/961 (47.55%), Query Frame = 0
Query:   11 LLNVKTIDIEAKDRTQMTALHSAASNGSYEVCDLLLQHGADIRCRDEEDMTPLHFASMEGHVDIVELLFDVGEKQGGYTMLAKMIMDQDRDDQTALHLAVENGHCDIVKLCISKGANVNFVKTNMNTPLHIACTSGEEGIVQTLVESEAD----IEAKNVLQETPLHRAALFNRINIVRYLLDRDAEIDCRDKDKKTPLMNAVRKDNVETVKLLLQRGADIKVKDAADKTSLYVAAEEDCWDVINI---IRKIPQSSSLLEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNIVNDEDDASNTPLHLAALEGHENVLSILLEKGAA-VDARNAMLWTPLDCAASRGWTWCAENLLDAD-SLIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVITRKDHLGRNCLDWAIENNQRDAALAILDCEQWKNALR--NCTAEGNKVTTPMRKLIKKLPDVAEKVFDKCIKGNGLPVEHPQYEISCSYEFLEDSFTEWGPSVFDFKALEIKKQHVVHNANSNVTMDTQKKSYCHMIGRKLHLPGYVKKQTERKRNHPLKFMVQNERTKLLCHPLVTYLLRHKWRSLGRYFYYSKLFLYIIYLFFLTGFALNIITDKYECLNSNSTLSSNTTTPNSSGQTSYDKNVISAAQFAPYGDCICVQVFNVLYENKPSAKSRQFFVGYGKHIVLFL-AVFSLIIEFAKLISQLHQYFLP-HCVVEFTSYILSILYVIESFAYNGAPIEIMSRCTDWQRSLGAITVWLSWINLVLFMRKFPKLGIYVVMFTDILKTFAQFFTVFALFVISFGLGFHMMLYEQRPRAFSTPLRAILKTTMGMLGEFEYDTVFNDDY--NPLP---TAWVIYVAYLIVCCIIVMNLLVGLAVDDIKGVQEQAALKRLAMQVDLTLDVEKALPLSIQNKLIKTEELIYPN 953
            LL  +TID+  +     TA+  A +  + E   +LL+ GA     ++    P+H A+  G  + +E++   GE+ G    L    M+  +   T LHLAV+NG  +++K+C+  GA ++ V+    T +H A T G   IV+ ++ S +     +   +   ET LHRA+LF+   +  YL+   A+I+  D + ++PL+ A    +   V LLL +GA + +KD   +  L++  ++  + + N+     ++ Q   L+ + D +  TPLH A  +G   +V  LL     I +K+    +PLH A+ YGR    + LL++     ++N+ D    TPLHLAA  GH+ V+ +LL+KGA  +   N   WT L  A+  G+T   + +LD +    D  D+   T LH A++EGH   + LL+S  A I        + L  A+ N +++  L I+  ++W   L+  +  + GNK   P+ ++I+ LP+  + + D C+        H   + SC   ++E          ++FK L+   +        +V  +                               L  MVQN R +LL HP+    L  KW + G   +   L  Y + L  +T   +NI       +  NST   N T+ +S    + +  +I          C+                           I++FL ++F    E  ++  Q   YF+    V+E+  Y   I++V+  F    A ++       WQ   GAI V+  W+N +L++++F   GI++VM   ILKT  +   VF   +++FGL F+++L  Q P  FS+PL +I++T   MLG+  Y   F + Y  N L     ++   V++ I   I++MNLL+GLAV DI  VQ+ A+LKR+AMQV+L   +EK LPL    K+ +   ++YPN
Sbjct:  150 LLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGK--ATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQP-YGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNG--WTALHHASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQA-SFLHLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKC--PITEMIEYLPECMKVLLDFCML-------HSTEDKSCRDYYIE----------YNFKYLQCPLEFTKKTPTQDVIYEPLT---------------------------ALNAMVQNNRIELLNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPG----MAFNSTGIINETSDHSEILDTTNSYLIKT--------CM---------------------------ILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFVEIPAHLQ-------WQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNLQDP--FSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVYPN 1008          

HSP 2 Score: 126.716 bits (317), Expect = 2.071e-29
Identity = 127/488 (26.02%), Postives = 199/488 (40.78%), Query Frame = 0
Query:   53 RCRDEEDMTPLHFASMEGHVDIVELLFDVGEKQGGYTMLAKMIMDQDRDDQTALHLAVENGHCDIVKLCISKGANVNFVKTNMNTPLH----------------------------------IACTSGEEGIVQTLVESEADIEAKNVLQETPLHRAALFNRINIVRYLL--------DRDAEIDCRDKDKKTPLMNAVRKDNVETVKLLLQRGADIKVKDAADKTSLYVAAEEDCWDVINI-IRKIPQSSSLLEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNI-----------------------------------VNDEDDASNTPLHLAALEGHENVLSILLEKGAAVDARNAMLWTPLDCAASRGWTWCAENLLDADS---LIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVITRKDHLGRNCLDWAIENNQRDAALAILD 459
            RC D+ D   LH+A+ EG ++++E +     +     +L +M    D    T LH AVE    + VK  +S+GAN N    NM  PLH                                  IACT+     +Q L++  A     N     P+H+AA       +  +L         R   I+  +  K TPL  AV+  ++E +K+ L  GA I   +    T+++ AA +   +++ + I     S  ++   D    T LH AS   H +  + L+S+G+ I+  + +  +PL LA+      IV LLL +    +I                                   V DED+   TPLH A  +G    ++ LL    ++ +++    +PL  AAS G     + LL   S   L++  D    TPLHLA+K GH  +++LL+ +K  +   DH G   L  A           ILD
Sbjct:   58 RC-DDMDTFFLHYAAAEGQIELMEKI----TRDSSLEVLHEM----DDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLL-KKGALFLSDHNGWTALHHASMGGYTQTMKVILD 535          

HSP 3 Score: 89.7373 bits (221), Expect = 4.568e-18
Identity = 72/215 (33.49%), Postives = 105/215 (48.84%), Query Frame = 0
Query:  227 IKVKDAADKTSLYVAAEEDCWDVINIIRKIPQSSSL--LEEFDKNENTPLHIASTKGHIKAVEVLLSMGSLIDAKNDQNLTPLHLASKYGRSRIVRLLLEESGTHNIVNDEDDASNTPLHLAALEGHENVLSILLEKGAAVDARNAMLWTPLDCAASRGWTWCAENLL--------DADSLIDPTDKAKTTPLHLASKEGHVDMIKLLISRKAVI 431
            +K  D  D   L+ AA E     I ++ KI + SSL  L E D   NTPLH A  K  I++V+ LLS G+  + +N   + PLH+A +   + ++++LLE       VN E +  NT + +A    +   L ILL+KGA     N     P+  AA  G   C E +L             I+  +  K TPLHLA + G ++MIK+ +   A I
Sbjct:   56 LKRCDDMDTFFLHYAAAEG---QIELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTID--VNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNGAQI 265          
The following BLAST results are available for this feature:
BLAST of TCONS_00008171-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPA12.615e-10228.51Transient receptor potential cation channel subfam... [more]
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