TCONS_00008156-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008156-protein
Unique NameTCONS_00008156-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length410

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008156-protein ID=TCONS_00008156-protein|Name=TCONS_00008156-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
MNFTEHKMTATAPNKNSLEILELVFLCVICALTLLGNCLVILAFFWGPRS
LRNYTNFFVVNLAVSDLMVGCLSLPFWIVYRADIELVDREKYTFFISLDI
LCGTTSILSLSAISLERMFAVKFPTTHFNLTSKPIKLGIVVTWFLAIIFT
GSKFAIRTPTQIRAYTASIFTLAFLVPLLIIVASYTIIFIAAVKMMNEAN
TTGKLAREIHVAKTISVIITLFVICWMPFFVINMVWVFCSDYCDQKRNYR
WVVHISKMMHYANSMMNFFVYAVRLPDFRRAFKAILFKCDTSGFRERVRT
FSESIVTRGRTASERQSFFADQTMNTSNGTLNNNHSPITDKVKKHQQQGS
ICKHNNQQPRLSSHSNCTEVSIMDDTWSPTTMNSNTSSNDTSSSSNPLLA
SHHDMTVSSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004593XLOC_004593Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008156TCONS_00008156Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 253..279
score: 23.3
coord: 21..45
score: 26.18
coord: 55..76
score: 37.26
coord: 99..121
score: 32.67
coord: 211..235
score: 29.52
coord: 166..189
score: 27.98
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 30..286
e-value: 0.003
score: -61.8
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 36..271
e-value: 2.0E-36
score: 125.5
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..335
e-value: 4.7E-64
score: 215.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..410
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 16..295
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 36..271
score: 29.66

Blast
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BLAST of TCONS_00008156-protein vs. Swiss-Prot (Human)
Match: AA2AR (Adenosine receptor A2a OS=Homo sapiens GN=ADORA2A PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.334e-29
Identity = 111/401 (27.68%), Postives = 177/401 (44.14%), Query Frame = 0 
Query:   29 ICALTLLGNCLVILAFFWGPRSLRNYTNFFVVNLAVSDLMVGCLSLPFWIVYRADIELVDREKYTFFISLDILCGT-TSILSLSAISLERMFAVKFPTTHFNLTSKPIKLGIV-VTWFL--AIIFT--------GSKFAIRTPTQI--RAYTASIFT--------------LAFLVPLLIIVASYTIIFIAA---VKMMNEANTTGKLAR-----EIHVAKTISVIITLFVICWMPFFVINMVWVFCSDYCDQKRNYRWVVHISKMMHYANSMMNFFVYAVRLPDFRRAFKAILFKCDTSGFRERVRTFSESIVTRGRTASERQSFFADQTM------NTSNGTLNNNHSPITDKVKKHQQQGSICKHNNQQPR---------LSSH---SNCTEVSIMDD 375
            I  L +LGN LV  A  W   +L+N TN+FVV+LA +D+ VG L++PF I                FI+  +L  T +SI SL AI+++R  A++ P  +  L +     GI+ + W L  AI  T        G     +  +Q       A +F                  LVPLL+++  Y  IF+AA   +K M      G+ AR     E+H AK++++I+ LF +CW+P  +IN    FC D C       W+++++ ++ + NS++N F+YA R+ +FR+ F+ I+        R  V    E     G +A    +  +D             G   N  +P  ++       G +   + Q+ +         L SH     C E   +DD
Sbjct:   16 IAVLAILGNVLVCWAV-WLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTG--FCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD-CSHAP--LWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII--------RSHVLRQQEPFKAAGTSARVLAAHGSDGEQVSLRLNGHPPGVWANGSAPHPERRPNGYALGLVSGGSAQESQGNTGLPDVELLSHELKGVCPEPPGLDD 402
The following BLAST results are available for this feature:
BLAST of TCONS_00008156-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AA2AR1.334e-2927.68Adenosine receptor A2a OS=Homo sapiens GN=ADORA2A ... [more]
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