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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008137-protein ID=TCONS_00008137-protein|Name=TCONS_00008137-protein|organism=Clytia hemisphaerica|type=polypeptide|length=970bp
MSKEVTDSTEEEFYEVDKIIDSKIDEATGRYRYLIRWKGFSPEYDTWEPK
ENLSLCLDLLEKFKEDKKEKKRLLKNKKKSFPPPIQIKPEPTSDRKSSTS
SSSGNESEDGNEESGTKKNKLDPNLEGLTRKQKRQYLEVLERSKTDVISP
TSSTSSPGPLSNRNETESSDSDTLSQLKKKHKKKKMVIDSEPDEEGSKDE
SSQPMEIDEPGPSKMKKKKPSEILDNLLRPDNENASEASKRKSEASKKNP
EASKTTEKPSKTKPSEKDNGSSSYKPLFSQLQEQTEPIEGSPTSSQTKKK
SLKKVPGNIQYEEQQSDSNSNNSPLASPLGISRKQNASKINEKIKNLQQV
VRDKRVAGGNLTSKPPLNKQLSVDSAKQSISQPTPTPLSQTSAPAPKTSA
NNILNVLSGMQLGSKSTSSTQKPSTENATTSTKQPVHRSNSLPSTNTVAP
TENTSKTSTQNNKKTTDKIPSASTQKKSKNKKLSLQEYQAKKQHGSSSND
EGGMMFEFTRLPSSSSLSKASGPIRTQNSSDNAVIIPPKPVEQRRPSASK
PTQPAHRVPAREQLATGGDVIGNILDAIQPNQIGRTANATSSNVSQNDAS
LSEGTEEDIILEDVGGEDSELDGEFDDDLEECSGDEDFFEATPYTNHLSL
PAANALPIDLPVINEYILKGEEQCLIQSFIKAELINEYVDGQDTLLMKAV
MECNPAMVRTILEKGANPNIPSINTKTPLHMAVELQQKKIVSMLLQQGAH
LNMQTRDGKSALDVACSVGSIEIVQLLLVHGADVKPTLDTLKKTIRTKSS
PPEHLLNIIGSTLNSHYEKLSETVRKIYSNLITSTRMQLGACLMSTRCIS
PKEYGGTHTFYFDPSEINVIDKHQNVVMVAIPVIFERNGQVRVVLDLEKN
GVTNVILGPEDVPPKLASIPAVDSSNLVHILFPNKGYNTLQILTDVESSY
NILVSVYAVTFGKANVITHS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 57..80 |
| None | No IPR available | GENE3D | 2.40.50.40 | | coord: 14..80
e-value: 6.7E-18
score: 64.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 71..559 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 586..605 |
| None | No IPR available | CDD | cd00024 | CHROMO | coord: 12..60
e-value: 3.93316E-15
score: 70.7559 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 694..784
e-value: 2.29742E-23
score: 96.2986 |
| IPR000953 | Chromo/chromo shadow domain | SMART | SM00298 | chromo_7 | coord: 13..68
e-value: 8.9E-16
score: 68.4 |
| IPR000953 | Chromo/chromo shadow domain | PROSITE | PS50013 | CHROMO_2 | coord: 14..75
score: 17.915 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 757..786
e-value: 0.0073
score: 25.5
coord: 691..720
e-value: 0.046
score: 22.9
coord: 724..753
e-value: 0.012
score: 24.8 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 724..756
score: 12.289 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 757..789
score: 11.007 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 696..785
e-value: 1.8E-14
score: 54.0 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 769..901
e-value: 1.5E-4
score: 21.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 690..768
e-value: 3.9E-23
score: 80.9 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 691..789
score: 27.584 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 685..785 |
| IPR023780 | Chromo domain | PFAM | PF00385 | Chromo | coord: 14..65
e-value: 7.6E-15
score: 54.5 |
| IPR023779 | Chromo domain, conserved site | PROSITE | PS00598 | CHROMO_1 | coord: 33..53 |
| IPR016197 | Chromo domain-like | SUPERFAMILY | 54160 | Chromo domain-like | coord: 8..69 |
Blast
The following BLAST results are available for this feature:
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