Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008021-protein ID=TCONS_00008021-protein|Name=TCONS_00008021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1795bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00008021-protein vs. Swiss-Prot (Human)
Match: CAC1C (Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo sapiens GN=CACNA1C PE=1 SV=4) HSP 1 Score: 1645.94 bits (4261), Expect = 0.000e+0 Identity = 913/1775 (51.44%), Postives = 1178/1775 (66.37%), Query Frame = 0 Query: 33 ANGTTTPAAAATKKKN----PSNVGQNI--RPKRALCCLSLSNPVRRACISIVEWKPFDIFILLNIFATCAVLAAYEPLPNQDTSETNDKLEKAEYFFIVVFTIECILKILAYGFAFHPGAYLRSGWNILDFTIVIIGLLTLIFQQYINVD-------------VKALRAFRVLRPLRLVSGVQSLQIVLTSIVKALIPLFYIALLVVFVIIIYAIIGVELFMGKLRHTCYNTTS-RELLDPDDPHPCS--TGKYGFACPNGTICTDQVWEGPNYGITNFDNIAFAGLTVFQCITLEGWTDVMYMVEDTLGNYWIWLYFVTLIIWGSFFVLNLVLGVLSGEFAKEKSRQTKSGKFQKIREKHLVDEAVKGYLDWIQQAEDIE-NGEEDGEEQEMEYGAN---GRLHKRNSEYPAGIEIT-PNLQDALGQ---SSKYDRFKKRMTKFHYRLRRTCRKIVKSQTFYWAVIIAVALNSLVLACEHHGQPEYVTLFLDRANYFFLGLFSFEMILKIYCLGFSGYCRSLFNRFDGLVVLSSLLEVAITLPTGINPIGISVLRCIRLLRIFKVTRYWESLSNLVESLVNSIKSIASLLLLLSLFILIFALLGMQIFGGRFNFEDEDMPRSNFNTFWRSLVTVYQILTGEDWNAVMYYGIKSWGGIKNPWAIIAIVYFISLVVIGNYILLNVFLAIAVDNLADAENLTKIDKEEKKRKKEEK-KRKKDEKKLQQLRRNPGT----------QSISQDSENPPVAIEAPTNERIRIAQENYLENGGGTSSSFNSSMDQHNDDEDGKRL--GIRPLRLSEINLLKDSPEPLPEANSMFIFKKTNIFRIYCYQLCTHRYFVNTILIMICCSSILLAAEDPLQIDVKRNNILDYFD--------------------YIFTAIFTVEIIIKLVAYGVFLHEGSFCRSLFNMLDLLIVSVSVIAIILRGSKEISVVRILRVVRVLRPLRAINRAKGLKHVVSCVIVALRSIGNIVVVTVLFIFMFAVIGIQLFKGTFSYCTDSAVKVESECKGEYIEYVNGPETKSLTDGERRPREWLTHKFNFDNVFQAMMTLFVVMTFEGWPGILENAMDSTEPNKGPEQDNRPYVAIYFVFYIIIIAFFMVNIFVGFVIVTFQNEGEEEFKGCELDKNQRKCIEYVLRVHPICRFVPPHQTQYHIWRVVTSRMFEYMIFAFIVANTVVLGAQYYNAPKTYETVLDGFNIGFTMVFLLECILKLLALRPRNYFMDPWNIFDFVIVVGSIVDIIIGEST------------------------------------------KDSSFKFNFFRLFRALRLVKLLSKGTGIRTLLWTFMKSFQALPYVGLLIVLLFFIYAVIGMQVFGGIKTGGDINEDNAITRFNNFQTFPAAALLLFRSSTGENWQQIMNSCLDRDDVRCEQDES------ARCGSSFAYVYFITFNMICSFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEYVRTWSEYDPDATGRMKHVDIVSMLKRIQPPLGFGKCCPHREACKRLVSMNMIMNNDGTVDFHATLFALVRTSLSIKKPDVKSNTAKENLELRSIIKHIWPRTNEKILNKVIPKPDSEEGITVGKFYATFLIQEYFRRFKKKRQD----ERRRRNADSTVSLKAGLRTIQDIGPKLRRKLSGEIAENPEEEGRLEKENKRKSFMDSFRRS-LVFGE-----ADKKRSAFSKQKEDRSQMEQPLLNVSMSSDDMKRHSYHGSSSYDKSSFEDSSA 1686 N T + ++ +K+ P G RP RAL CL+L NP+RRACISIVEWKPF+I ILL IFA C LA Y P P D++ TN LE+ EY F+++FT+E LK++AYG FHP AYLR+GWN+LDF IV++GL + I +Q D VKALRAFRVLRPLRLVSGV SLQ+VL SI+KA++PL +IALLV+FVIIIYAIIG+ELFMGK+ TCYN ++ DDP PC+ TG +G C NGT+C W+GP +GITNFDN AFA LTVFQCIT+EGWTDV+Y V D +G W W+YFVTLII GSFFVLNLVLGVLSGEF+KE+ + G FQK+REK ++E +KGYLDWI QAEDI+ E++G ++E + N+E AG +I N L SK+ R+ +R +F RR CR VKS FYW VI V LN+L +A EH+ QP ++T D AN L LF+ EM+LK+Y LG Y SLFNRFD VV +LE + ++P+GISVLRC+RLLRIFK+TRYW SLSNLV SL+NS++SIASLLLLL LFI+IF+LLGMQ+FGG+FNF++ RS F+ F +SL+TV+QILTGEDWN+VMY GI ++GG P ++ I YFI L + GNYILLNVFLAIAVDNLADAE+LT KEE++ K+ +K R +K Q+L P +SI+ D E+PP +I ++ N S + + +DE+ + G RP LSE++L K+ P+PEA++ FIF N FR+ C+++ F N IL I SSI LAAEDP+Q RN+IL YFD Y+FT+IFT+EII+K+ AYG FLH+GSFCR+ FN+LDLL+VSVS+I+ ++ S I+VV+ILRV+RVLRPLRAINRAKGLKHVV CV VA+R+IGNIV+VT L FMFA IG+QLFKG C+DS+ + E+ECKG YI Y +G + +PR W KF+FDNV AMM LF V TFEGWP +L ++DS +KGP + R ++I+F+ YIIIIAFFM+NIFVGFVIVTFQ +GE+E+K CELDKNQR+C+EY L+ P+ R++P +Q QY +W VV S FEY++F I+ NT+ L Q+Y ++ ++ N+ FT +F +E ILKL+A +P+ YF DPWN+FDF+IV+GSI+D+I+ E+ ++S FFRLFR +RLVKLLS+G GIRTLLWTF+KSFQALPYV LLIV+LFFIYAVIGMQVFG I +N+ I R NNFQTFP A LLLFR +TGE WQ IM +C+ E + S CGSSFA YFI+F M+C+FLIINLFVAVIMDNFDYLTRDWSILGPHHL+E+ R W+EYDP+A GR+KH+D+V++L+RIQPPLGFGK CPHR ACKRLVSMNM +N+DGTV F+ATLFALVRT+L IK + N + N ELR+IIK IW RT+ K+L++V+P P ++ +TVGKFYATFLIQEYFR+FKK+++ + +RNA +SL+AGLRT+ DIGP++RR +SG++ E + +++ S D FRR+ +FG RSAF + + + S + H S++ SS+ + + Sbjct: 69 GNATISTVSSTQRKRQQYGKPKKQGSTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIADVPAEDDPSPCALETG-HGRQCQNGTVCKPG-WDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAVGRDWPWIYFVTLIIIGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRF---CRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPNWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCI-YFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQELVEKPAVGESKEEKIELKSITADGESPPAT---------KINMDDLQPNENEDKSPYPNPETTGEEDEEEPEMPVGPRPRPLSELHL-KEKAVPMPEASAFFIFSSNNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRNHILFYFDIVFTTIFTIEIALKILGNADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSA-INVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDHPII----QPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSPSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIA----LNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIK---TEGNLEQANEELRAIIKKIWKRTSMKLLDQVVP-PAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNA---LSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTTQRPLHINKAGSSQGDTESPSHEKLVDSTFTPSSYSSTGS 1811 The following BLAST results are available for this feature:
BLAST of TCONS_00008021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|