TCONS_00008021-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008021-protein
Unique NameTCONS_00008021-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1795

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008021-protein ID=TCONS_00008021-protein|Name=TCONS_00008021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1795bp
MADDKNAANGSVSDGFNYNQIQTLQNFGNNYPANGTTTPAAAATKKKNPS
NVGQNIRPKRALCCLSLSNPVRRACISIVEWKPFDIFILLNIFATCAVLA
AYEPLPNQDTSETNDKLEKAEYFFIVVFTIECILKILAYGFAFHPGAYLR
SGWNILDFTIVIIGLLTLIFQQYINVDVKALRAFRVLRPLRLVSGVQSLQ
IVLTSIVKALIPLFYIALLVVFVIIIYAIIGVELFMGKLRHTCYNTTSRE
LLDPDDPHPCSTGKYGFACPNGTICTDQVWEGPNYGITNFDNIAFAGLTV
FQCITLEGWTDVMYMVEDTLGNYWIWLYFVTLIIWGSFFVLNLVLGVLSG
EFAKEKSRQTKSGKFQKIREKHLVDEAVKGYLDWIQQAEDIENGEEDGEE
QEMEYGANGRLHKRNSEYPAGIEITPNLQDALGQSSKYDRFKKRMTKFHY
RLRRTCRKIVKSQTFYWAVIIAVALNSLVLACEHHGQPEYVTLFLDRANY
FFLGLFSFEMILKIYCLGFSGYCRSLFNRFDGLVVLSSLLEVAITLPTGI
NPIGISVLRCIRLLRIFKVTRYWESLSNLVESLVNSIKSIASLLLLLSLF
ILIFALLGMQIFGGRFNFEDEDMPRSNFNTFWRSLVTVYQILTGEDWNAV
MYYGIKSWGGIKNPWAIIAIVYFISLVVIGNYILLNVFLAIAVDNLADAE
NLTKIDKEEKKRKKEEKKRKKDEKKLQQLRRNPGTQSISQDSENPPVAIE
APTNERIRIAQENYLENGGGTSSSFNSSMDQHNDDEDGKRLGIRPLRLSE
INLLKDSPEPLPEANSMFIFKKTNIFRIYCYQLCTHRYFVNTILIMICCS
SILLAAEDPLQIDVKRNNILDYFDYIFTAIFTVEIIIKLVAYGVFLHEGS
FCRSLFNMLDLLIVSVSVIAIILRGSKEISVVRILRVVRVLRPLRAINRA
KGLKHVVSCVIVALRSIGNIVVVTVLFIFMFAVIGIQLFKGTFSYCTDSA
VKVESECKGEYIEYVNGPETKSLTDGERRPREWLTHKFNFDNVFQAMMTL
FVVMTFEGWPGILENAMDSTEPNKGPEQDNRPYVAIYFVFYIIIIAFFMV
NIFVGFVIVTFQNEGEEEFKGCELDKNQRKCIEYVLRVHPICRFVPPHQT
QYHIWRVVTSRMFEYMIFAFIVANTVVLGAQYYNAPKTYETVLDGFNIGF
TMVFLLECILKLLALRPRNYFMDPWNIFDFVIVVGSIVDIIIGESTKDSS
FKFNFFRLFRALRLVKLLSKGTGIRTLLWTFMKSFQALPYVGLLIVLLFF
IYAVIGMQVFGGIKTGGDINEDNAITRFNNFQTFPAAALLLFRSSTGENW
QQIMNSCLDRDDVRCEQDESARCGSSFAYVYFITFNMICSFLIINLFVAV
IMDNFDYLTRDWSILGPHHLEEYVRTWSEYDPDATGRMKHVDIVSMLKRI
QPPLGFGKCCPHREACKRLVSMNMIMNNDGTVDFHATLFALVRTSLSIKK
PDVKSNTAKENLELRSIIKHIWPRTNEKILNKVIPKPDSEEGITVGKFYA
TFLIQEYFRRFKKKRQDERRRRNADSTVSLKAGLRTIQDIGPKLRRKLSG
EIAENPEEEGRLEKENKRKSFMDSFRRSLVFGEADKKRSAFSKQKEDRSQ
MEQPLLNVSMSSDDMKRHSYHGSSSYDKSSFEDSSADPAGNDRIGVGQKF
MNKMTPWKKPKSDNDLSDVKVQEQRNATRNYPIPDIVVRQPKEEEKDFNK
FRRPSLKLLPPSSTIDQNSDNDNMSVVSETSSYTGDRKDGTTSPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004516XLOC_004516Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008021TCONS_00008021Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005446VDCC_L_a1su
IPR002077VDCCAlpha1
IPR014873VDCC_a1su_IQ
IPR005821Ion_trans_dom
IPR031649GPHH_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005891voltage-gated calcium channel complex
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005245voltage-gated calcium channel activity
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0070588calcium ion transmembrane transport
GO:0055085transmembrane transport
GO:0006811ion transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0005891 voltage-gated calcium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005245 voltage-gated calcium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 696..732
NoneNo IPR availableGENE3D1.10.238.10coord: 1417..1513
e-value: 5.9E-10
score: 38.6
NoneNo IPR availableGENE3D1.10.287.70coord: 1159..1410
e-value: 1.4E-59
score: 200.6
coord: 835..1114
e-value: 4.9E-56
score: 189.1
coord: 80..355
e-value: 5.6E-54
score: 182.4
coord: 461..699
e-value: 9.5E-50
score: 168.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1597..1616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 709..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1636..1795
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1036..1113
coord: 836..992
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 82..238
coord: 286..354
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 462..697
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1160..1405
IPR005446Voltage-dependent calcium channel, L-type, alpha-1 subunitPRINTSPR01630LVDCCALPHA1coord: 110..128
score: 46.2
coord: 529..544
score: 42.36
coord: 358..371
score: 48.02
coord: 617..630
score: 41.27
coord: 161..172
score: 40.28
coord: 440..458
score: 26.02
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 1329..1341
score: 74.28
coord: 1277..1291
score: 88.96
coord: 1109..1129
score: 65.4
coord: 310..327
score: 47.83
coord: 200..215
score: 57.91
coord: 626..652
score: 69.04
coord: 349..373
score: 49.56
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainSMARTSM01062Ca_chan_IQ_2coord: 1540..1574
e-value: 1.8E-11
score: 54.1
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainPFAMPF08763Ca_chan_IQcoord: 1485..1563
e-value: 1.8E-25
score: 88.9
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 82..359
e-value: 1.3E-66
score: 224.2
coord: 1161..1412
e-value: 1.5E-63
score: 214.3
coord: 463..700
e-value: 2.9E-52
score: 177.3
coord: 836..1117
e-value: 2.6E-64
score: 216.7
IPR031649Voltage-dependent L-type calcium channel, IQ-associated domainPFAMPF16905GPHHcoord: 1414..1484
e-value: 1.4E-32
score: 111.2

Blast
BLAST of TCONS_00008021-protein vs. Swiss-Prot (Human)
Match: CAC1C (Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo sapiens GN=CACNA1C PE=1 SV=4)

HSP 1 Score: 1645.94 bits (4261), Expect = 0.000e+0
Identity = 913/1775 (51.44%), Postives = 1178/1775 (66.37%), Query Frame = 0
Query:   33 ANGTTTPAAAATKKKN----PSNVGQNI--RPKRALCCLSLSNPVRRACISIVEWKPFDIFILLNIFATCAVLAAYEPLPNQDTSETNDKLEKAEYFFIVVFTIECILKILAYGFAFHPGAYLRSGWNILDFTIVIIGLLTLIFQQYINVD-------------VKALRAFRVLRPLRLVSGVQSLQIVLTSIVKALIPLFYIALLVVFVIIIYAIIGVELFMGKLRHTCYNTTS-RELLDPDDPHPCS--TGKYGFACPNGTICTDQVWEGPNYGITNFDNIAFAGLTVFQCITLEGWTDVMYMVEDTLGNYWIWLYFVTLIIWGSFFVLNLVLGVLSGEFAKEKSRQTKSGKFQKIREKHLVDEAVKGYLDWIQQAEDIE-NGEEDGEEQEMEYGAN---GRLHKRNSEYPAGIEIT-PNLQDALGQ---SSKYDRFKKRMTKFHYRLRRTCRKIVKSQTFYWAVIIAVALNSLVLACEHHGQPEYVTLFLDRANYFFLGLFSFEMILKIYCLGFSGYCRSLFNRFDGLVVLSSLLEVAITLPTGINPIGISVLRCIRLLRIFKVTRYWESLSNLVESLVNSIKSIASLLLLLSLFILIFALLGMQIFGGRFNFEDEDMPRSNFNTFWRSLVTVYQILTGEDWNAVMYYGIKSWGGIKNPWAIIAIVYFISLVVIGNYILLNVFLAIAVDNLADAENLTKIDKEEKKRKKEEK-KRKKDEKKLQQLRRNPGT----------QSISQDSENPPVAIEAPTNERIRIAQENYLENGGGTSSSFNSSMDQHNDDEDGKRL--GIRPLRLSEINLLKDSPEPLPEANSMFIFKKTNIFRIYCYQLCTHRYFVNTILIMICCSSILLAAEDPLQIDVKRNNILDYFD--------------------YIFTAIFTVEIIIKLVAYGVFLHEGSFCRSLFNMLDLLIVSVSVIAIILRGSKEISVVRILRVVRVLRPLRAINRAKGLKHVVSCVIVALRSIGNIVVVTVLFIFMFAVIGIQLFKGTFSYCTDSAVKVESECKGEYIEYVNGPETKSLTDGERRPREWLTHKFNFDNVFQAMMTLFVVMTFEGWPGILENAMDSTEPNKGPEQDNRPYVAIYFVFYIIIIAFFMVNIFVGFVIVTFQNEGEEEFKGCELDKNQRKCIEYVLRVHPICRFVPPHQTQYHIWRVVTSRMFEYMIFAFIVANTVVLGAQYYNAPKTYETVLDGFNIGFTMVFLLECILKLLALRPRNYFMDPWNIFDFVIVVGSIVDIIIGEST------------------------------------------KDSSFKFNFFRLFRALRLVKLLSKGTGIRTLLWTFMKSFQALPYVGLLIVLLFFIYAVIGMQVFGGIKTGGDINEDNAITRFNNFQTFPAAALLLFRSSTGENWQQIMNSCLDRDDVRCEQDES------ARCGSSFAYVYFITFNMICSFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEYVRTWSEYDPDATGRMKHVDIVSMLKRIQPPLGFGKCCPHREACKRLVSMNMIMNNDGTVDFHATLFALVRTSLSIKKPDVKSNTAKENLELRSIIKHIWPRTNEKILNKVIPKPDSEEGITVGKFYATFLIQEYFRRFKKKRQD----ERRRRNADSTVSLKAGLRTIQDIGPKLRRKLSGEIAENPEEEGRLEKENKRKSFMDSFRRS-LVFGE-----ADKKRSAFSKQKEDRSQMEQPLLNVSMSSDDMKRHSYHGSSSYDKSSFEDSSA 1686
             N T +  ++  +K+     P   G     RP RAL CL+L NP+RRACISIVEWKPF+I ILL IFA C  LA Y P P  D++ TN  LE+ EY F+++FT+E  LK++AYG  FHP AYLR+GWN+LDF IV++GL + I +Q    D             VKALRAFRVLRPLRLVSGV SLQ+VL SI+KA++PL +IALLV+FVIIIYAIIG+ELFMGK+  TCYN     ++   DDP PC+  TG +G  C NGT+C    W+GP +GITNFDN AFA LTVFQCIT+EGWTDV+Y V D +G  W W+YFVTLII GSFFVLNLVLGVLSGEF+KE+ +    G FQK+REK  ++E +KGYLDWI QAEDI+   E++G ++E     +         N+E  AG +I   N    L      SK+ R+ +R  +F    RR CR  VKS  FYW VI  V LN+L +A EH+ QP ++T   D AN   L LF+ EM+LK+Y LG   Y  SLFNRFD  VV   +LE  +     ++P+GISVLRC+RLLRIFK+TRYW SLSNLV SL+NS++SIASLLLLL LFI+IF+LLGMQ+FGG+FNF++    RS F+ F +SL+TV+QILTGEDWN+VMY GI ++GG   P  ++ I YFI L + GNYILLNVFLAIAVDNLADAE+LT   KEE++ K+ +K  R    +K Q+L   P            +SI+ D E+PP           +I  ++   N     S + +      +DE+   +  G RP  LSE++L K+   P+PEA++ FIF   N FR+ C+++     F N IL  I  SSI LAAEDP+Q    RN+IL YFD                    Y+FT+IFT+EII+K+ AYG FLH+GSFCR+ FN+LDLL+VSVS+I+  ++ S  I+VV+ILRV+RVLRPLRAINRAKGLKHVV CV VA+R+IGNIV+VT L  FMFA IG+QLFKG    C+DS+ + E+ECKG YI Y +G     +     +PR W   KF+FDNV  AMM LF V TFEGWP +L  ++DS   +KGP  + R  ++I+F+ YIIIIAFFM+NIFVGFVIVTFQ +GE+E+K CELDKNQR+C+EY L+  P+ R++P +Q QY +W VV S  FEY++F  I+ NT+ L  Q+Y     ++  ++  N+ FT +F +E ILKL+A +P+ YF DPWN+FDF+IV+GSI+D+I+ E+                                           ++S     FFRLFR +RLVKLLS+G GIRTLLWTF+KSFQALPYV LLIV+LFFIYAVIGMQVFG I     +N+   I R NNFQTFP A LLLFR +TGE WQ IM +C+       E + S        CGSSFA  YFI+F M+C+FLIINLFVAVIMDNFDYLTRDWSILGPHHL+E+ R W+EYDP+A GR+KH+D+V++L+RIQPPLGFGK CPHR ACKRLVSMNM +N+DGTV F+ATLFALVRT+L IK    + N  + N ELR+IIK IW RT+ K+L++V+P P  ++ +TVGKFYATFLIQEYFR+FKK+++     +  +RNA   +SL+AGLRT+ DIGP++RR +SG++    E +  +++     S  D FRR+  +FG          RSAF +    +  +       S    +   H     S++  SS+  + +
Sbjct:   69 GNATISTVSSTQRKRQQYGKPKKQGSTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIADVPAEDDPSPCALETG-HGRQCQNGTVCKPG-WDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAVGRDWPWIYFVTLIIIGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRF---CRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPNWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCI-YFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQELVEKPAVGESKEEKIELKSITADGESPPAT---------KINMDDLQPNENEDKSPYPNPETTGEEDEEEPEMPVGPRPRPLSELHL-KEKAVPMPEASAFFIFSSNNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRNHILFYFDIVFTTIFTIEIALKILGNADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSA-INVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDHPII----QPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSPSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIA----LNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIK---TEGNLEQANEELRAIIKKIWKRTSMKLLDQVVP-PAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNA---LSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTTQRPLHINKAGSSQGDTESPSHEKLVDSTFTPSSYSSTGS 1811          
The following BLAST results are available for this feature:
BLAST of TCONS_00008021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAC1C0.000e+051.44Voltage-dependent L-type calcium channel subunit a... [more]
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