TCONS_00007998-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007998-protein
Unique NameTCONS_00007998-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length248

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007998-protein ID=TCONS_00007998-protein|Name=TCONS_00007998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
MSLQWLSAAAFLYAEVGIGVLLCLDFISNARWQSIFTSRLLAIIKQYGNF
IFNSFVFFMLILFIESIHKAHKFSNIKFDNNLANNPQAEVQAHMKLFRAQ
RNLYITGFALFMLLVLRRLVTLISKQATLEASHAAAIKQAQGASEQAQKL
LEENEKLSKGKRRDANEENEQKENMENHIDILKKELKDKKDKLEKAEKDL
TAMKQQSENLTTEYNRMADERNAMEKKLRILGESAASVGDDDSSKKDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004508XLOC_004508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007998TCONS_00007998Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008417BAP29/BAP31
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..227
NoneNo IPR availableGENE3D1.10.287.620coord: 88..236
e-value: 1.1E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..178
IPR008417B-cell receptor-associated protein 29/31PFAMPF05529Bap31coord: 1..215
e-value: 6.2E-62
score: 208.7

Blast
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BLAST of TCONS_00007998-protein vs. Swiss-Prot (Human)
Match: BAP31 (B-cell receptor-associated protein 31 OS=Homo sapiens GN=BCAP31 PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 1.732e-55
Identity = 109/229 (47.60%), Postives = 150/229 (65.50%), Query Frame = 0 
Query:    1 MSLQWLSAAAFLYAEVGIGVLLCLDFISNARWQSIFTSRLLAIIKQYGNFIFNSFVFFMLILFIESIHKAHKFSNIKFDNNLANNPQAEVQAHMKLFRAQRNLYITGFALFMLLVLRRLVTLISKQATLEASHAAAIKQAQGASEQAQKLLEENEKLSKGKRRDANEEN---------EQKENMENHIDILKKELKDKKDKLEKAEKDLTAMKQQSENLTTEYNRMADE 220
            MSLQW + A FLYAEV + +LLC+ FIS  RWQ IF SRL+ ++  YGN  F   +  +++L I+++ +  K+ ++    NL NNP A    HMKLFRAQRNLYI GF+L +  +LRRLVTLIS+QATL AS+ A  KQA+ ASE A+K +EEN++L KG   D  + +         E+  +++  +  LK EL   K KLEKAE  + AM++QSE LT EY+R+ +E
Sbjct:    1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEE 229
The following BLAST results are available for this feature:
BLAST of TCONS_00007998-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BAP311.732e-5547.60B-cell receptor-associated protein 31 OS=Homo sapi... [more]
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