TCONS_00007926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007926-protein
Unique NameTCONS_00007926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2009

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007926-protein ID=TCONS_00007926-protein|Name=TCONS_00007926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2009bp
MLELKNTSETLESTTKELNEKTSALESTTTNLQETKATLSDTSNKLGETE
NILKETSEKLGSTEKDLECTISELNENKDLLEKTQGELSNTRNNLSQSNN
DLTTAHQELIDIKSNLDETVEELVNNTNNFMSAKSQLAHTERKLEQTTNE
KDQKIDDLQDKVRSAEDQITNLEETLTNTKSELKNTSEALRSTQDILTEK
TTELEHLTADLETTKSIVTSTGIKLDDTEKALRETTEKLSSTESYLESTA
SKLKDTSSCLSDTAETLQTTCKELEKTQSTLSSTNQELSATKDELSNTQS
TLQKTSTELSETKEKLSSTEDILTMKTEEYEREKAKIQTEAEEMTHLLVE
KNEEINTNLVSLEQFTKDIEQLKENLSSTENTLSETKSELASTEEELSTN
QKALSYTVITSNEMEGKLKEKESRISNLEESLQSTTNDLNEKTSELEYTV
SSLQGTKEALEEAKSSLAEKETSIGELTMKLDTTENTLESTITELIEKKE
VLDKTQEELSTAQKSLNQSQTDLQVTRQEVVEAKLNLEETVKELVSATTE
LMGTKGTLADTENTLEDVRKDSNNTIEELKEQIRSIERKVVDLXVRKDSN
NTIEELKEQIRSIERKVVDLEETNEKTTSALKETTERLTSTEETVALKTN
ELDKNKVELQETISKLSQSKHEVLEKEKLLESSMKSFEEQQNEKNQTILQ
LEMKMESAEKRIADLVQNSVIIPTDFMEDEAVPEVVLEVEATPEVVPEVE
STPEVVPEVEEVPEVVSEVETTPEVVPEVEAVPESVPEVEATPEVVPEVE
ATPDVVPEVEAVPEVVPEVEATPEVVPEVEAVPEAVPEVEATPEVVPEVE
AVPEAVPEVEATPEVVPEVEATPEVVPEVETTPEVVPEVKAVPEAVPEVE
ATTEVVPEVEAIPEVVPEVENTPKVVPEVKSVPEAVPEIESTPEVVSEVE
AVPEAVPKVEATPEVVPEVEATPEVVPEVEATPEVVPEVKAVPEDVPEVE
ATPEVVPEVEATPEVVPEVEATPEVVPEVEATPEVVPEVEATSETLLEVE
AVPEVVPEVKTVPEAIPEVEATPEVVPEVEAVPEAVPEVEATPEVVPEVE
ATPEVVPEVEAVPEAVPEVEATPEVVPEVEATPEVVPEVEDTPEVVPEVK
ATPEVVPEVEAGPEAVPEVEATPEVVPEVEAAPEAVPEVEATPEVVPEVE
ATPEVVPEVEDTPEVVPEVKAVPEAVPEVEATPEVVPEVEATPEVVPEVE
DTPEVVPEVKATPEVVPEVEAGPEAVPEVEASPEVVPEVEAVLEAVPEVE
ATPEVVPEVEATPEVVPEVEDTPEVVPEVKATPEVVPEVEAGPEAVPEVE
ATPEVVPEVEAGPEAVPEVEASPEVVPEVEAVLEAVPEVEATPEVVPEVE
ATPEVVPEVEATPEIVSEFEATSETVPEVEAVPEVVPEVEATQEAPEIVP
EIEATSEVVPEVEAVPEVVPEVEAVPEVVLEVDAVPEVVPEVEATPEVVP
EVKATPEVVIEIKATPEVVPEVEATQEVVPEVETTPEVVPGVEAVPEVNT
EIEATPEVVPDVETTSEIVPEVEATSKVVPEVEATPEVDPKVEATPEVDP
KVEATSKVVPEVKAVPEVVPEVETTAEIVPEVEAVPEVVPELEATPDIVP
EVEATSEVVPEVEATSEVVPEMEAVPDIVAEVEAVPEATAATEKTTEEAA
PVPATEEAAPAPATEEAAPAPATEEAAPEPATEEATPAPATEEAAPAPAT
EEAATEEAAPEPATEEVAPVPATEEATPTLAAEEVASEEVPCELVETKIQ
THTAVEEAVEEFVESCKVVAVENAPTSDVIDEESVEMDKDQSEDIEEMKQ
KSDEIEKEYSHLKGRLEKIEKEYSELKDKKDKIKQEKSELKDHNEQLEAK
IKALEIMMSGTLDANNNPDETSAQYDTLSNTCAELEGEIRKLKLRVLVRD
TEVERLKGYLEDVFKKTKKGKSGHRRTKRILYDEKKQHPGAMMLNNKRKS
ASMSNILDV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004472XLOC_004472Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007926TCONS_00007926Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000Score = Score = SequenceCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilCoilG3DSA:1.20.5.50G3DSA:1.10.287.620G3DSA:1.20.120.330G3DSA:1.20.1270.60SSF57997SSF57997
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..543
NoneNo IPR availableCOILSCoilCoilcoord: 1838..1914
NoneNo IPR availableCOILSCoilCoilcoord: 362..403
NoneNo IPR availableCOILSCoilCoilcoord: 595..637
NoneNo IPR availableCOILSCoilCoilcoord: 411..445
NoneNo IPR availableCOILSCoilCoilcoord: 558..593
NoneNo IPR availableCOILSCoilCoilcoord: 274..315
NoneNo IPR availableCOILSCoilCoilcoord: 327..354
NoneNo IPR availableCOILSCoilCoilcoord: 130..189
NoneNo IPR availableCOILSCoilCoilcoord: 1925..1945
NoneNo IPR availableCOILSCoilCoilcoord: 684..718
NoneNo IPR availableCOILSCoilCoilcoord: 1..24
NoneNo IPR availableCOILSCoilCoilcoord: 450..480
NoneNo IPR availableCOILSCoilCoilcoord: 64..101
NoneNo IPR availableCOILSCoilCoilcoord: 649..669
NoneNo IPR availableGENE3D1.20.5.50coord: 354..460
e-value: 2.7E-6
score: 26.7
NoneNo IPR availableGENE3D1.10.287.620coord: 213..353
e-value: 4.4E-6
score: 25.8
coord: 88..212
e-value: 4.0E-12
score: 45.4
NoneNo IPR availableGENE3D1.20.120.330coord: 461..591
e-value: 1.3E-7
score: 30.8
coord: 596..719
e-value: 0.013
score: 14.6
coord: 1796..1973
e-value: 3.5E-8
score: 32.7
NoneNo IPR availableGENE3D1.20.1270.60coord: 1..87
e-value: 0.033
score: 13.3
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 321..565
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 130..352

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000Sequence
Match NameE-valueIdentityDescription
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