Ras family protein (polypeptide) - C. hemisphaerica

Overview
NameRas family protein
Unique NameTCONS_00007920-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length424

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007920-protein ID=TCONS_00007920-protein|Name=Ras family protein|organism=Clytia hemisphaerica|type=polypeptide|length=424bp
MPSQPKVIASIKNHYNSYHLHRHSLNIDRPKSPRDDGGHSPKSASPSRSP
TFFHHRRLHPSKSLPTFRFSQHGGGFPSSHQKGPPHVNESIVLSRNMLSL
LTLGELPESGESGESDEESRNNHQQQSSNTTDSSTNNTSTTSSANNNKAT
MKMKEQKDFDNIHIALAGAKNCGKSALAVRYLTKRFIGEYDSHKDDIWHR
SMTVADREVRVSLKDTTGTSWLKTPAPLISWTTAIVVVYSITDRNSFALA
RHILEIIDKIKPLSSRCTLLIGNKCDLMHLRQVPKSDAKKLADDFGVHFL
ECSAAENYDDIFSSFTRLLVEAMIAQSAKKHSWDDQNADDVKQNENRLRK
RSLSTGQAPSKDSNNNTSFLGGLREKKDSMIKIDERIPSPVEQRDTPAPQ
RKQSLRRKISGIGSKLVGSGQSNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004470XLOC_004470Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007920TCONS_00007920Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 162..183
score: 28.77
coord: 202..224
score: 20.51
coord: 264..277
score: 43.86
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 159..325
e-value: 2.0E-13
score: 60.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 164..322
e-value: 0.0013
score: -70.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 162..325
e-value: 8.9E-8
score: -12.6
NoneNo IPR availableGENE3D3.30.70.1390coord: 160..225
e-value: 6.2E-7
score: 28.8
NoneNo IPR availableGENE3D3.40.50.300coord: 226..322
e-value: 5.3E-18
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..87
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 164..317
e-value: 1.0E-26
score: 93.4
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 155..417
score: 14.822
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 161..323

Blast
[Close]
BLAST of Ras family protein vs. Swiss-Prot (Human)
Match: RSLBA (Ras-like protein family member 11A OS=Homo sapiens GN=RASL11A PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.392e-32
Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 0 
Query:  161 NIHIALAGAKNCGKSALAVRYLTKRFIGEYDSHKDDIWHRSMTVADREVRVSLKDTTGTSWLKTPAP--------LISWTTAIVVVYSITDRNSFALARHILEIIDKIKPLSSRCTLLIGNKCDLMHLRQVPKSDAKKLADDFGVHFLECSAAENYDDIFSSFTRLLVEA 322
            +I +A+ GA   GKSA+ VR+LTKRFIG+Y+ +   ++ R + V   ++ + ++DT G   ++   P         + W    ++VYSITD +S+   R + + I K+ P S    +++GNK DL+H RQV   D  +LA++ G  FLE S +ENY+D+   F  L  E 
Sbjct:   27 DIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHLCKEV 196
The following BLAST results are available for this feature:
BLAST of Ras family protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSLBA8.392e-3235.88Ras-like protein family member 11A OS=Homo sapiens... [more]
back to top