TCONS_00007366-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007366-protein
Unique NameTCONS_00007366-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007366-protein ID=TCONS_00007366-protein|Name=TCONS_00007366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MSLAVFLKEVLNLRGNYDRVAKLTFRNVTKTTDVYQFCSDAFFEAEFDWE
LKEELEKTDFVQIQIFNYKPFMKNRLIAHYQVSCKKLKEEPWVPITDYLV
DVNNTIIRSEISIELLYVDEFPRDKDVNSFEVFRPIEVKMRVLEDWELES
RASKNSKFSLTSSLKRKLGSMAGSMTSSKRLALLESGELDEEGGGGGGGG
KKKKKAKKEKERFNLHPKVRVRLKSQREELTFKVQIKLIEGRNLAGTQLD
PIVDAYCFDEKKKSKPREQTNNPSWDEPIEFNAVCQRELAMDQILRFEVR
IEIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004145XLOC_004145Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007366TCONS_00007366Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3D2.60.40.150coord: 1..122
e-value: 3.7E-10
score: 39.4
IPR000008C2 domainPFAMPF00168C2coord: 234..299
e-value: 3.0E-4
score: 20.9
coord: 14..88
e-value: 0.0025
score: 18.0
IPR000008C2 domainGENE3D2.60.40.150coord: 197..302
e-value: 7.3E-11
score: 41.4
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 4..120
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 230..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..211

Blast
[Close]
BLAST of TCONS_00007366-protein vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 5.112e-20
Identity = 44/118 (37.29%), Postives = 73/118 (61.86%), Query Frame = 0 
Query:    1 MSLAVFLKEVLNLRGNYDRVAKLTFRNVTKTTDVYQFCSD-AFFEAEFDWELKEELEKTDFVQIQIFNYKPFMKNRLIAHYQVSCKKLKEEPWVPITDYLVDVNNTIIRSEISIELLY 117
            M+L + LK V  LRG  DR+AK+TFR  +  + V + C D A F+  F W +   +++ + ++IQ+FNY     N+LI  +++  +K+ EE  V +TD L+D NN II++ + +E+ Y
Sbjct:    1 MALLIHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEMLEIQVFNYSKVFSNKLIGTFRMVLQKVVEESHVEVTDTLIDDNNAIIKTSLCVEVRY 118
The following BLAST results are available for this feature:
BLAST of TCONS_00007366-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTOF5.112e-2037.29Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3[more]
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