TCONS_00007358-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007358-protein
Unique NameTCONS_00007358-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007358-protein ID=TCONS_00007358-protein|Name=TCONS_00007358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MADDKGDNLKQENNDCPPKEVVDDDELDALLDDALSDFVKPPPKPKKVEK
KTEQHDQGSDLGNFLDDDALLKMSEGWNEVLQQMSSEDPGLMEEFDSFQK
QFPMGGAMGGFPGTAPEGANFDEHMKNALKDLTNNFNDLNMEGQDFGADF
GGDFSEMMKEMQASMETQQGQGGAEGDTIFPEGDAFMGMMQGMMENLLTK
DLLYPSLSEIKERYPSWLSENKEKLTPEDYLKYKSQNDIVVQLCDLFEQE
ADTDTEQTKKERTSKVVELMQKMQVFGQPPADMMAGISDSNQIPPMPQQC
SVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004137XLOC_004137Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007358TCONS_00007358Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006708Pex19
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005777 peroxisome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006708Pex19 proteinPFAMPF04614Pex19coord: 73..300
e-value: 3.5E-38
score: 131.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63

Blast
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BLAST of TCONS_00007358-protein vs. Swiss-Prot (Human)
Match: PEX19 (Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.578e-30
Identity = 77/232 (33.19%), Postives = 125/232 (53.88%), Query Frame = 0 
Query:   64 FLDDDALLKMSEGWNEVLQQMSSEDPGLMEEFDSFQKQFPMGGAMGGFPGTAPEGANFDEHMKNALKDLTNNFNDLNMEGQDFGADFGGDFSEMMKEMQASMETQQGQGGAEGDTIFPEGDAFMGMMQGMMENLLTKDLLYPSLSEIKERYPSWLSENKEKLTPEDYLKYKSQNDIVVQLCDLFEQEADTDTEQTKKERTSKVVELMQKMQVFGQPPADMMAGISDSNQIPP 295
              D +   + +  + + +++++ E+P L+E+F   QK     G +G    +  E   F   +K  L  L  N  DL               SE  +E+  +ME   G G  EGD    EG+  + +MQ +M+NLL+KD+LYPSL EI E+YP WL  ++E L PE + KY+ Q+ ++ ++C+ FE E  TD+E T+K R   V++LMQ++Q  G PP ++      + ++PP
Sbjct:   74 LFDSELASQATAEFEKAMKELAEEEPHLVEQF---QKLSEAAGRVGSDMTSQQE---FTSCLKETLSGLAKNATDLQ----------NSSMSE--EELTKAME---GLGMDEGDG---EGN-ILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKEL------AGEMPP 274
The following BLAST results are available for this feature:
BLAST of TCONS_00007358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEX191.578e-3033.19Peroxisomal biogenesis factor 19 OS=Homo sapiens G... [more]
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