TCONS_00007097-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007097-protein
Unique NameTCONS_00007097-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007097-protein ID=TCONS_00007097-protein|Name=TCONS_00007097-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1218bp
MEEHNKEEKKQISDESPTTTITNDTSKSQQEKIDSTQKEVLEPCSSENMD
YHNSTSQEGTETSQTTNISETTDQSSQQSEVTNISETTDQSSQQSEVTNI
SETTDQSSQQSELTNISETTDQSSQQSEVTRVSETTDTSLTQEAEVDNFN
IQPAVCSVCGKEIPNLFDVIDNRTTDTVTHYCERCEVIKQKNEFMFAERQ
KSVEEVVIVSDEETKKGEKKIEIVNLENIKIKKEGKKRKSQETKHSKPSK
VPKKSARQSTKTKTADVITLSSSSSGDDENDDVIIEQGFKRKVHGIFMKP
FVSKHKTNDVIEKVDITDEDVKHPKYKLYQNNKEKASKSPISKSSITGSN
IASITVEKKDGVSSSKSAVVVSTSPTIKPIILSPITVEDSKDKPVVISPT
PIDLDHSLEQPIDDLECHTQNVADNSLPSSLETSSQIEDSTDKVDIDDSD
LVIERKVEKQAVEKVITSETEPNTEKIEREEQNDNAIKGSLDDPPNITTV
SNVDEGEDFASENTNTISGTKLSEESFGTNKTSNEKNQRNNVETKSLITS
SQTSSQDSGKTEVNNQSMESELDETGEKTELSNSKEQNLHSTESTDDEDK
ELSAQTETTVIPETPPSIVESSSQSNEKNDSHCTTLSKSNDKNESHCTTQ
SKSNEKNDNHCTTQSKSNDKNESHITTPSQSSSISSILPSLTSDAKDPDN
HPCTFKEDSSFSKILSKDVEPGDKTRNTEQDLKPKELNETNNSKTDDETS
TRQTSKKKSTTSNKYSGISAFLANFEGHATNNMADEVREEPSLKELTVVE
QPTLDEDTRDYQEPMETSEWKSTDWGWIERNERPKLMGVCRKEYHSSFEN
YLRGSYWSPDGSALLTNSDDNILRIFDTSSLDKQHHEKEENSSDLKPKVR
LSEGETVYDVAWYPFMRSQDPDTCCFLATSRDHPVHLWDSNTGRVRCSYR
SFDQMDEITSPHSVSFNYDGSKVYCGFNNCIRIFDSNRPGRQFVERSIVR
KKTRSRKERQQKSLNQRGIVSSIAFSNQYSGLYALGTFTKTVGLYAANED
EPLFLLREHKGGITHLRFTSDGFYLFSGARKDNELIAWDMRNTSIPLFKM
QREVSTNQRILFDIDQTCRYLCSGNTNNEVSVWDINNIMQNVGEEVVKHH
PLFSFNAHQDAVNGISIHPTSKYIATTSGQRHFFVNDADSDDDVITMEKT
KQKQISHCYDNSLKIWKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003966XLOC_003966Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007097TCONS_00007097Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 894..939
e-value: 12.0
score: 10.2
coord: 1148..1187
e-value: 0.0016
score: 27.7
coord: 837..877
e-value: 0.48
score: 19.0
coord: 1049..1089
e-value: 0.0023
score: 27.2
coord: 1093..1134
e-value: 280.0
score: 1.6
coord: 942..985
e-value: 17.0
score: 9.2
coord: 1007..1046
e-value: 280.0
score: 1.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 1151..1216
e-value: 0.18
score: 12.6
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 974..1218
e-value: 7.7E-31
score: 107.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 828..973
e-value: 1.2E-13
score: 50.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..763
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..445
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1121..1135
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1013..1196
score: 11.656
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 856..1197

Blast
[Close]
BLAST of TCONS_00007097-protein vs. Swiss-Prot (Human)
Match: WAP53 (Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 5.476e-100
Identity = 155/354 (43.79%), Postives = 228/354 (64.41%), Query Frame = 0 
Query:  831 NERPKLMGVCRKEYHSSFENYLRGSYWSPDGSALLTNSDDNILRIFDTSSLDKQHHEKEE-NSSDLKPKVRLSEGETVYDVAWYPFMRSQDPDTCCFLATSRDHPVHLWDSNTGRVRCSYRSFDQMDEITSPHSVSFNYDGSKVYCGFNNCIRIFDSNRPGRQFVERSIVRKKTRSRKERQQKSLNQRGIVSSIAFSNQYSGLYALGTFTKTVGLYAANEDEPLFLLREHKGGITHLRFTSDGFYLFSGARKDNELIAWDMRNTSIPLFKMQREVSTNQRILFDIDQTCRYLCSGNTNNEVSVWDINNIMQNVGEEVVKHHPLFSFNAHQDAVNGISIHPTSKYIATTSGQRHF 1183
            ++ P+ +     E+ +  EN+L+G  W+PDGS +LTNS DNILRI++     + +HE E+   +++ P +R+ EG+T+YD  WY  M S  PDT    ++SR++P+H+WD+ TG +R S+R+++ +DE+T+ HS+ F+ DGS+++CGFN  +R+F + RPGR    R+   KK             Q GI+S IAFS     LYA G++ +++GLYA ++  PL LL  H+GGITHL F  DG   FSGARKD EL+ WD+R +  PL+ + REV+TNQRI FD+D T ++L SG+T+  VSVWD +    N G    K  P+ SF   +D  NG+S+HP+   +AT SGQR F
Sbjct:  151 SQLPRFLSGSWSEFSTQPENFLKGCKWAPDGSCILTNSADNILRIYNLPP--ELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATFAKKQ-----------GQSGIISCIAFSPAQP-LYACGSYGRSLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFDLDPTGQFLVSGSTSGAVSVWDTDGP-GNDG----KPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQRVF 485
The following BLAST results are available for this feature:
BLAST of TCONS_00007097-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WAP535.476e-10043.79Telomerase Cajal body protein 1 OS=Homo sapiens GN... [more]
back to top