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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00007016-protein ID=TCONS_00007016-protein|Name=TCONS_00007016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1808bp
MSECLHCPAGFRCDGLTLPVICDQGTFSATGESTCQPCLIGNQCPTQGLP
SPVPCPLGTYSNSTGEINCLLCPAGHQCKNTSLAPEICDDGTYSTGGRSE
CVLCPGGFSCDIKEGQPLSCAKGFYSEHGKMSCQQCTVGHFCPTANISAP
IPCQAGYYANETGSTECTICPLGSYCPDPAASPAQCPDGKFSPGICSDCI
DCAAGFSCKSGIVSSCPAGTFSNAGQTSCTPCHTGNYCPNENTTAPVPCL
LGMFVNESNAIQCNDCPVGHACSNTSITPVLCTDGSYSLGKASECTQCPA
GRSCVSGKISSCPEGTHSNIGQSSCAPCTIGNYCPNENTTAPVPCPLGTF
SNESNAIQCTDCPAGFQCSDTSLTPVECADGTYSLSKRSECVQCPAGKSC
TDKSVEPVICLKGSYSPAGVKDCIPCGIGHYCPSDGSHQQSPCAIGWYAT
SPGSDKCLQCDRGNKCPDPTSPPEQCGPGYYADATGLTYCVPCPPGYYTT
ENGTAHCTICPEGNKCPIPHNLPIPCSGGEYQPEEGKDFCLPVPSGLVVT
DGKTPKECQAGEYSNGTACVECPKGFYCPSSTTTPIVCKAGTYANALSST
SCQLCPSGYSCLNAADAPVSCTAGSYSVAGQIKCTTCPTGQFSYNTASSC
SPCPGGSYCTNGTAPVVPPLPCAFGFYSVVGQGQCKECPQHTYTPGFGAQ
FCTPCPVGSTCDDPTAIPIPCSDGTYWSNADETPKCIACPAGYSCEDSKV
PPVPCKKGFYSTGGNSTCLPCPEGYSCLDSTQPVSCKIGEYSLSGVEYCT
PCPPGFSCPTPNQAAGPCPAGTYSLKGEGTCNNCSAGFMCPSTSHAPIQC
RVGQTTNGLQNQVNCTNCLAGFACPTAASPMEECSAGYYSFSGATKCTYC
PAGYQCPTRNTRPTICTQGTFSAGGQTTCHQCSAGFSCESIYSNSSKPCP
GGTYAAAGSHKCTPCPQGSSCPDPTVSNAVSCDPGSFAVGTQTTCTVCPP
GWECPKTDASENKQCQFGYYSKGNATSCTLCPAGFECRRTDISEPVACKP
GTFSTGGQVKCTRCPSGSSCPDLDKATINQCPTGSYSLSGEATCTECPPG
YACPSLFEPLILACPRGTYSVGAKSECTPCPAGEECKNNTQVGVACSDGY
YSLEGSYSCTPCPAGYYCPVKNDRPRICEAGKYNDPMRTTCLDCNAGYVC
VEGSTKATPEIGLCPLGSYCEDKINAIKCPSGTYGQKTGGISEXEGSTKA
TPEIGLCPLGSYCEDKINAIKCPSGTYGQKTGGISEADACKACPEGYYCE
AGTPGFPKHSVRCPPGHFCLEGTKTASQHPCPNGFFNTEIGAVRQDQCKE
CLPGYYCSGGDPTGDSLCPTGHYCPQKTESSTQYPCSAGYYTEEKGATTA
TDCKVCPAGYYCLEGSDSPTACPPGTYNPVPMQGAASNCRPCEAGFACPL
SASTQPTEQCSAGYYCPEGSSSPSDPLNACPAGTYTDYHNLTADSQCDGC
PAGQACSAGTGGNQKPPQPCAAGYYCLPRTRHPKQHPCPAGSYSNLTNLH
KWTDCTECPKGQYCLEGAAAPSGICPTGHYCPPGTKYATEHPCAAGTYSN
RTANVRWEVCEDCTEGNYCPQGSSVPTACPKGRYRKDLNGKALGDCSPCP
AGYYCPIDGTFQPLECGTGNFSSSNAWQCSICNAGYYCMSNTTTYVEMST
KFICPAGMHCPAGSDRQPWAANNPCEKGQYCVQGNEHAYPQKCPNGTYYP
FTNGKHVRDCLPCREGYYCSPEGQTDLTDKCPPGYFCPEGTGYAFAHPCP
VGYYRNSS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 331..378
e-value: 6.9E-6
score: 35.6
coord: 1523..1575
e-value: 0.0058
score: 25.8
coord: 789..831
e-value: 0.67
score: 18.6
coord: 1578..1613
e-value: 7.6
score: 9.0
coord: 91..136
e-value: 0.41
score: 19.7
coord: 1034..1081
e-value: 6.2E-4
score: 29.1
coord: 235..282
e-value: 0.0078
score: 25.4
coord: 381..410
e-value: 76.0
score: 0.0
coord: 575..621
e-value: 5.0E-5
score: 32.7
coord: 139..186
e-value: 9.6E-9
score: 45.1
coord: 985..1031
e-value: 1.6
score: 15.1
coord: 413..460
e-value: 2.7E-4
score: 30.3
coord: 887..932
e-value: 31.0
score: 3.5
coord: 285..328
e-value: 1.0
score: 16.9
coord: 463..510
e-value: 5.2E-4
score: 29.3
coord: 935..982
e-value: 0.3
score: 20.1
coord: 1275..1331
e-value: 0.52
score: 19.4
coord: 189..232
e-value: 1.0
score: 16.8
coord: 513..572
e-value: 1.2
score: 16.2
coord: 25..88
e-value: 1.5E-5
score: 34.4
coord: 675..721
e-value: 2.8E-8
score: 43.5
coord: 1616..1666
e-value: 2.3E-8
score: 43.8
coord: 1084..1127
e-value: 0.16
score: 21.1
coord: 1217..1272
e-value: 4.5
score: 11.1
coord: 1669..1717
e-value: 5.9
score: 10.0
coord: 742..786
e-value: 0.015
score: 24.5
coord: 1746..1799
e-value: 1.3
score: 15.8
coord: 837..884
e-value: 44.0
score: 2.2
coord: 624..672
e-value: 0.038
score: 23.1
coord: 1354..1403
e-value: 1.3
score: 16.0
coord: 1409..1459
e-value: 2.7E-5
score: 33.6
coord: 1149..1214
e-value: 0.0089
score: 25.2
coord: 1463..1520
e-value: 2.8
score: 12.9 |
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | PFAM | PF07699 | Ephrin_rec_like | coord: 675..716
e-value: 3.3E-6
score: 26.6 |
| IPR006150 | Cysteine-rich repeat | SMART | SM00289 | WR1_2 | coord: 184..218
e-value: 54.0
score: 4.0
coord: 1741..1783
e-value: 43.0
score: 5.1
coord: 586..622
e-value: 84.0
score: 2.0
coord: 1627..1667
e-value: 40.0
score: 5.4
coord: 1270..1314
e-value: 47.0
score: 4.7
coord: 1112..1147
e-value: 28.0
score: 7.0 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 123..141
e-value: 0.097
score: 12.2
coord: 1463..1483
e-value: 0.29
score: 10.7 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 175..208
e-value: 0.0089
score: 15.6
coord: 142..174
e-value: 6.8E-7
score: 28.8
coord: 1210..1253
e-value: 0.0075
score: 15.8
coord: 1623..1654
e-value: 1.2E-9
score: 37.6
coord: 1021..1045
e-value: 0.0022
score: 17.6 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 1785..1808
e-value: 0.0078
score: 16.1
coord: 737..784
e-value: 5.5E-4
score: 19.8
coord: 1582..1622
e-value: 1.9E-8
score: 34.0 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 517..563
e-value: 8.1E-6
score: 25.6
coord: 1102..1154
e-value: 3.3E-10
score: 39.7
coord: 672..736
e-value: 2.0E-10
score: 40.4
coord: 1322..1374
e-value: 5.3E-12
score: 45.4
coord: 72..122
e-value: 3.5E-10
score: 39.6
coord: 1528..1581
e-value: 4.7E-13
score: 48.8
coord: 7..69
e-value: 3.4E-9
score: 36.4
coord: 209..266
e-value: 7.2E-11
score: 41.8
coord: 321..370
e-value: 1.3E-12
score: 47.4
coord: 1484..1527
e-value: 8.6E-6
score: 25.5
coord: 469..516
e-value: 6.8E-10
score: 38.7
coord: 614..669
e-value: 3.0E-9
score: 36.6
coord: 835..900
e-value: 8.7E-9
score: 35.1
coord: 1725..1784
e-value: 6.3E-13
score: 48.4
coord: 1414..1462
e-value: 2.5E-16
score: 59.3
coord: 417..468
e-value: 4.0E-11
score: 42.6
coord: 785..834
e-value: 2.5E-9
score: 36.9
coord: 901..965
e-value: 6.6E-11
score: 41.9
coord: 1046..1101
e-value: 3.6E-9
score: 36.4
coord: 1257..1321
e-value: 1.8E-11
score: 43.7
coord: 267..320
e-value: 1.3E-8
score: 34.6
coord: 966..1020
e-value: 1.6E-7
score: 31.1
coord: 1655..1719
e-value: 4.3E-10
score: 39.3
coord: 371..416
e-value: 1.9E-9
score: 37.2
coord: 564..613
e-value: 6.8E-11
score: 41.9
coord: 1375..1413
e-value: 2.9E-9
score: 36.6
coord: 1155..1209
e-value: 6.1E-12
score: 45.2 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1445..1508
score: 7.507 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 309..370
score: 5.934 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1296..1359
score: 7.051 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 555..613
score: 6.188 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1078..1138
score: 6.175 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1707..1771
score: 8.116 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1561..1621
score: 5.846 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1724..1804
coord: 1644..1697 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1479..1636 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 197..331 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1079..1232 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1227..1375 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 442..575 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 305..446 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 87..235 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 538..707 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 970..1104 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1330..1467 |
Blast
The following BLAST results are available for this feature:
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