TCONS_00006886-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006886-protein
Unique Name	TCONS_00006886-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	613

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006886-protein ID=TCONS_00006886-protein|Name=TCONS_00006886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=613bp
YLFNAKLNIGSFCLKRSTEPDRASKSRNIRNPRENSRKQLKNLFLQIKMP
RISSRRSEASEMEIDGLAEQELLRLQQEYRIMEGDRKAYSEESQNIIRKQ
RAAIASLQAENEELMKDSKLAGSQQNENKDTVNVDHLNKLLVDEGDMKGH
LQKVQDMITSYDIKIKQTEKKISQQRKSMGGVHMSQAKQVALQKHIRVLE
NRLDQANRKFNHSLSENKDLRSDIDHMRTERTIFQNLYKKLEKNLNDNKD
EIAKVIESSTSAYDARDDAQNKMIALKEKSDKELLQYNTDLKELMRIIDH
DRKLKEFMSVKCEDRAEMLGFSLQHALRREERERKNEKEDVIQSYEMAFE
QIKDATDIEDLQLLVGKFIETEDKNFALFNYVNELNNEIDHLHEQISDTQ
NAIERFKQETIDTDEQREDILEKLKEKCTESEKEVDGFNKVQKKSSNLLD
EVRSGIESTFKKINCDVSSLVDMLGGDDGVTNANLMQYLGIIEQRTNELL
QVQAFLAAKDVDVAPTTTERAESVGLLGKGPLPLPAAISIQPPSTGDDYD
SDSSFQSEDENRPLTQQELRQRIMKGINKRENSSRREKEGRNSPDYEPER
PKKTSKKSPIKER

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003860	XLOC_003860	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006886	TCONS_00006886	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..216
None	No IPR available	COILS	Coil	Coil	coord: 382..409
None	No IPR available	COILS	Coil	Coil	coord: 421..441
None	No IPR available	COILS	Coil	Coil	coord: 231..258
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	COILS	Coil	Coil	coord: 328..348
None	No IPR available	COILS	Coil	Coil	coord: 72..117
None	No IPR available	GENE3D	1.20.5.50		coord: 364..471 e-value: 0.0027 score: 16.9 coord: 137..236 e-value: 1.6E-4 score: 20.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..613

Blast

[Close]

BLAST of TCONS_00006886-protein vs. Swiss-Prot (Human)
Match: CCD63 (Coiled-coil domain-containing protein 63 OS=Homo sapiens GN=CCDC63 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.300e-68
Identity = 170/547 (31.08%), Postives = 287/547 (52.47%), Query Frame = 0

Query:   58 EASEMEIDGLAEQELLRLQQEYRIMEGDRKAYSEESQNIIRKQRAAIASLQAENEELMKDSKLAGSQQNENKDTVNVDHLNKLLVDEGDMKGHLQKVQDMITSYDIKIKQTEKKISQQRKSMGGVHMSQAKQVALQKHIRVLENRLDQANRKFNHSLSENKDLRSDIDHMRTERTIFQNLYKKLEKNLNDNKDEIAKVIESSTSAYDARDDAQNKMIALKEKSDKELLQYNTDLKELMRIIDHDRKLKEFMSVKCEDRAEMLGFSLQ----HALRREERERKNEKEDVIQSYEMAFEQIKDATDIEDLQLLVGKFIETEDKNFALFNYVNELNNEIDHLHEQISDTQNAIERFKQETIDTDEQREDILEKLKEKCTESEKEVDGFNKVQKKSSNLLDEVRSGIESTFKKINCDVSSLVDMLGGDDGVTNANLMQYLGIIEQRTNELLQVQAF-----LAAKDVDVAPTTTERAESVGLLGKGPLPLPAAISIQPPSTGDDYDSDSSFQSEDENRPLTQQELRQRIMKGINKRENSSRREKEGRNSPD 595
            E SE   +  AE EL +L+Q++R M   RK++   +Q  I  Q   I +L+ E +E+     L  S +N N+   N   L  LL  + D +  ++ ++ ++   D KI Q EKKI+ Q++    +  +   +  LQK I +LE RL+     F+  L+ N  LR +I+ +R E+  + N+Y++L+  L   K  +   IE S+ AY+ R +A  +M A+K++  K+  QYN +++EL R+  H+ KLK F+ VK  DR E   F  Q     AL+ ++  +KN  E   +SYE+A  ++    +  +L  L+  F+  E+KNFA F YV ELNN+++ +H++    Q+ I   + +   + +    +L +L++K  ++ +E D +     + S  LD +++ +E  FKKINCD + ++  LG    VT+ NL QY  IIE++TN+LL ++ +     +   + ++ P           L K P P    I + PP  G D  SD   + +D  +PL    LRQ ++     +EN S +E  G + P+
Sbjct:   17 EPSEKAKEQQAEAELRKLRQQFRKMVESRKSFKFRNQQKIASQYKEIKTLKTEQDEITLLLSLMKSSRNMNRSEKNYMELRLLLQTKEDYEALIKSLKVLLAELDEKILQMEKKIANQKQIFAKMQEANNPR-KLQKQIHILETRLNLVTVHFDKMLTTNAKLRKEIEDLRFEKAAYDNVYQQLQHCLLMEKKTMNLAIEQSSQAYEQRVEAMARMAAMKDRQKKDTSQYNLEIRELERLYAHESKLKSFLLVKLNDRNE---FEEQAKREEALKAKKHVKKNRGES-FESYEVAHLRLLKLAESGNLNQLIEDFLAKEEKNFARFTYVTELNNDMEMMHKRTQRIQDEIILLRSQQKLSHDDNHSVLRQLEDKLRKTTEEADMYESKYGEVSKTLDLLKNSVEKLFKKINCDATKILVQLGETGKVTDINLPQYFAIIEKKTNDLLLLETYRRILEVEGAEAEIPPPFINPFWGGSALLKPPEP----IKVIPPVLGADPFSD---RLDDVEQPLDHSSLRQLVLDNYILKENRS-KEVRGDSLPE 550

The following BLAST results are available for this feature:

BLAST of TCONS_00006886-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006886-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCD63	3.300e-68	31.08	Coiled-coil domain-containing protein 63 OS=Homo s...	[more]

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TCONS_00006886-protein (polypeptide) - C. hemisphaerica