TCONS_00006848-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006848-protein
Unique NameTCONS_00006848-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006848-protein ID=TCONS_00006848-protein|Name=TCONS_00006848-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MADQQQYTTETNYKPTPPSDTSKTDVHFSDISHPKEILSMLNNLRINEQL
CDVTLLVGSKKILCHKVVLSAASPYFQAMFTGGLMESQLSEIKMHVHDEQ
AFSEIIDYFYSSRIDIKDTNVQDYVPIAGMLQLKRLQQACCDFMKRNIDA
QNCLGLYEFADSHSCQQLAQVAFSYSVNHFNEVLQTDKFCSISLDFVNKL
LSDNALNVTSEERVFEAAVAWIEYDRERRMCHAAQVCRNIRFSLLTPEYL
MDRVATESVVRDSRECSDLLMEAIEFRLLPKRKPQSAVAQVLPRKAALTQ
QILYVVGGMSRREATKSGEKYDPKEGRWKAIAEMSISRFGANMASLGSSI
FVCGGGDEASRLNTAEKFDSFHNVWIPLEPMSCKRNGVGVASLGGKIYAI
GGFDGSSPLSSAECYDPKTMKWSQIASMSQARFGVGCCVLNGEIYAIGGS
DGCNLRSCERYDPETNTWIVIASMSVARKQVACAAMGDCVYAIGGSDIYA
VSGTSADHAGRYQTVERYSPDTDQWIMVSPLLSPRSGAGAGVLDGLLYVC
GGFDGHQYLNTVEKYDPLTNRWTIGPPMIQSRDCVAVCVATCKRNKRLTT
ERDVLPRSSSPLTFSSAYNPLNLSNQTSAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003847XLOC_003847Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006848TCONS_00006848Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011705BACK
IPR000210BTB/POZ_dom
IPR006652Kelch_1
IPR015916Gal_Oxidase_b-propeller
IPR015915Kelch-typ_b-propeller
IPR017096BTB-kelch_protein
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00501KELCHREPEATcoord: 529..541
score: 29.09
coord: 394..407
score: 41.07
coord: 457..471
score: 36.25
NoneNo IPR availableGENE3D3.30.710.10coord: 36..188
e-value: 7.1E-40
score: 135.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableCDDcd14735BACK_Kelchcoord: 148..206
e-value: 1.19551E-17
score: 77.1339
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 495..590
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 299..496
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 153..255
e-value: 2.1E-34
score: 130.3
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 153..254
e-value: 2.6E-30
score: 104.5
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 51..148
e-value: 2.8E-23
score: 93.3
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 41..147
e-value: 1.0E-26
score: 93.2
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 51..118
score: 20.437
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 302..348
e-value: 3.1E-9
score: 46.7
coord: 349..395
e-value: 2.3E-10
score: 50.4
coord: 546..594
e-value: 2.6E-12
score: 56.9
coord: 396..442
e-value: 4.3E-19
score: 79.4
coord: 443..488
e-value: 3.7E-14
score: 63.0
coord: 497..545
e-value: 8.1E-9
score: 45.3
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 385..429
e-value: 3.8E-17
score: 61.5
coord: 337..382
e-value: 3.8E-7
score: 29.5
coord: 301..335
e-value: 1.1E-7
score: 31.2
coord: 477..531
e-value: 7.5E-7
score: 28.5
coord: 534..578
e-value: 6.8E-18
score: 63.9
coord: 431..475
e-value: 1.4E-17
score: 62.9
IPR015916Galactose oxidase, beta-propellerGENE3D2.130.10.80coord: 502..596
e-value: 3.7E-21
score: 74.9
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 253..501
e-value: 5.2E-53
score: 179.4
IPR017096BTB-kelch proteinPIRSFPIRSF037037Kelch_gigaxonincoord: 6..595
e-value: 1.3E-175
score: 582.8
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 30..146

Blast
[Close]
BLAST of TCONS_00006848-protein vs. Swiss-Prot (Human)
Match: KLH20 (Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4)

HSP 1 Score: 465.307 bits (1196), Expect = 2.327e-157
Identity = 229/550 (41.64%), Postives = 344/550 (62.55%), Query Frame = 0 
Query:   27 HFSDISHPKEILSMLNNLRINEQLCDVTLLVGSKKILCHKVVLSAASPYFQAMFTGGLMESQLSEIKMHVHDEQAFSEIIDYFYSSRIDIKDTNVQDYVPIAGMLQLKRLQQACCDFMKRNIDAQNCLGLYEFADSHSCQQLAQVAFSYSVNHFNEVLQTDKFCSISLDFVNKLLSDNALNVTSEERVFEAAVAWIEYDRERRMCHAAQVCRNIRFSLLTPEYLMDRVATESVVRDSRECSDLLMEAIEFRLLPKRKPQSAVAQVLPRKAALTQQILYVVGGMSRREATKSGEKYDPKEGRWKAIAEMSISRFGANMASLGSSIFVCGGGDEASRLNTAEKFDSFHNVWIP-LEPMSCKRNGVGVASLGGKIYAIGGFDGSSPLSSAECYDPKTMKWSQIASMSQARFGVGCCVLNGEIYAIGGSDGCN-LRSCERYDPETNTWIVIASMSVARKQVACAAMGDCVYAIGGSDIYAVSGTSADHAGRYQTVERYSPDTDQWIMVSPLLSPRSGAGAGVLDGLLYVCGGFDGHQYLNTVEKYDPLTNRWTI 574
            + SD  HP++ L ++N LR + +LCDV L+VG+KKI  H+V+LSA SPYF+AMFTG L ES+ +E+ +   DE+A   +ID+ Y+S+I +++ NVQ  +P A +LQL  +Q+ACC+F+KR +D  NCLG+  FAD+HSC++L ++A  ++ ++F EV+++++F  +  + +  ++S + LNV SEE+VF A +AW++Y  + R     QV +++R  LL+P++L+  V ++ +++   EC DL+ EA  + LLP+ +P     +  PRK     ++L+ VGG    +A  S E+YDP+   W+ +A MS  R G  ++ L   ++  GG D +S LN+ E++D   N W   + P S  R  VGVA LGG +YA+GG DG S L+  E YDPK  KW+++ASMS  R GV   VL G +YA+GGSDG + L + ERY+P+ N W  IA M   RK + CA   D +YA+GG           D      + ERY+P T+QW  V  + S RSG G  V++G L   GGFDG  YL T+E +DP  N W +
Sbjct:   45 YISD-KHPRQTLEVINLLRKHRELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQITVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSPKFLVGTVGSDPLIKSDEECRDLVDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGR----------DDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRL 583

HSP 2 Score: 149.443 bits (376), Expect = 3.757e-38
Identity = 86/215 (40.00%), Postives = 114/215 (53.02%), Query Frame = 0 
Query:  377 PLEPMSCKRNGVGVASLGGKIYAIGGFDGSSPLSSAECYDPKTMKWSQIASMSQARFGVGCCVLNGEIYAIGGSDGCN-LRSCERYDPETNTWIV-IASMSVARKQVACAAMGDCVYAIGGSDIYAVSGTSADHAGRYQTVERYSPDTDQWIMVSPLLSPRSGAGAGVLDGLLYVCGGFDGHQYLNTVEKYDPLTNRWTIGPPMIQSRDCVAVCV 589
            P +P+ C          G  ++A+GG+     +SS E YDP+T +W  +ASMS+ R GVG  VL+  +YA+GG DG + L S ERYDP+TN W   +A  S  R  V  A +G  +YA+GG D     G S         VERY P  ++W  V+ + + R G    VL G LY  GG DG   LNTVE+Y+P  NRW    PM   R  +   V
Sbjct:  310 PRKPIRC----------GEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQD-----GVSC-----LNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAV 504

HSP 3 Score: 107.071 bits (266), Expect = 3.166e-24
Identity = 56/169 (33.14%), Postives = 87/169 (51.48%), Query Frame = 0 
Query:  277 RLLPKRKPQSAVAQVLPRK----AALTQQILYVVGGMSRREATKSGEKYDPKEGRWKAIAEMSISRFGANMASLGSSIFVCGGGDEASRLNTAEKFDSFHNVWIPLEPMSCKRNGVGVASLGGKIYAIGGFDGSSPLSSAECYDPKTMKWSQIASMSQARFGVGCCVLN 441
            R  PK    + VA +  R+     A+    LY VGG        + E+Y+P+E RW  IA M   R     A     I+  GG D+ + L++AE+++   N W P+  M+ +R+GVG+A + G++ A+GGFDG++ L + E +DP    W     M+  R G G  V+ 
Sbjct:  432 RYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVIK 600
The following BLAST results are available for this feature:
BLAST of TCONS_00006848-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH202.327e-15741.64Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE... [more]
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