TCONS_00006808-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006808-protein
Unique NameTCONS_00006808-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length539

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006808-protein ID=TCONS_00006808-protein|Name=TCONS_00006808-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MEADEHGEKRPLQKGTTPLSDVLAKLGDKGWYPVVFCLCICVLNSTVAFN
HLIMASFGFTPPHSCKLPDGYTKNASIPMEMIKGKESYSQCKIYQDFNST
SGSTEGCPNGWNFILNGKESTIVNEWSLVCDHKYLVSLATTIYFTGVMIG
GAVFGQLGDKFGRKPITLICLYSHIALAVGVYFSQSFEVFAALRFFVGFF
LQGVQTNSYVLMAEMTSKKNLVLTVGFFEIFWAVGTLWLATLSWLIQDWR
NIQLALCLPSLITLIYIWLFPESVLWLINKNKMEEAKENLMKISRITGKK
LTAEDLDLIKPKVNESIQYSFHHLVKTPNIRKRTFLMCYLWLASSVGYYG
LSLAVGGLAGDRYLNQFIGSVIELVAFSSVIFVLKYFRRRYPLMAYYITG
GVTCIVAGVLKSQASKDGFRAATYLALIGKFGLSASFATIFLFTVEQFPT
VVRTLGMGTCVFWARVGGMIAPQILLLGKYTFNELPYLIFGSLSLLAAMA
TYFLPETFGKTLPNTIDEIEGITVEENGTELRDRDHIET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003808XLOC_003808Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006808TCONS_00006808Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 120..512
e-value: 4.1E-31
score: 108.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 29..287
e-value: 1.6E-26
score: 92.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 312..532
e-value: 2.0E-15
score: 56.0
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 36..509
score: 14.908
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 135..505
e-value: 6.86867E-25
score: 103.548
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 136..514

Blast
[Close]
BLAST of TCONS_00006808-protein vs. Swiss-Prot (Human)
Match: S22A5 (Solute carrier family 22 member 5 OS=Homo sapiens GN=SLC22A5 PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.898e-84
Identity = 156/486 (32.10%), Postives = 264/486 (54.32%), Query Frame = 0 
Query:   60 TPPHSCKLPDGYT-----KNASIPMEMIKGKESYSQCKIYQ----------------DFNSTSGSTEGCPNGWNFILNGKESTIVNEWSLVCDHKYLVSLATTIYFTGVMIGGAVFGQLGDKFGRKPITLICLYSHIALAVGVYFSQSFEVFAALRFFVGFFLQGVQTNSYVLMAEMTSKKNLVL--TVGFFEIFWAVGTLWLATLSWLIQDWRNIQLALCLPSLITLIYIWLFPESVLWLINKNKMEEAKENLMKISRITGKKLTAEDLDLIKPKVNESIQYSFHH---LVKTPNIRKRTFLMCYLWLASSVGYYGLSLAVGGLAGDRYLNQFIGSVIELVAFSSVIFVLKYFRRRYPLMAYYITGGVTCIVAGVLKSQASKDGFRAATYLALIGKFGLSASFATIFLFTVEQFPTVVRTLGMGTCVFWARVGGMIAPQILLLGKYTFNELPYLIFGSLSLLAAMATYFLPETFGKTLPNTIDEI 519
            TP H C++PD        +N ++P+ +  G+E    C+ Y+                D +      E C +GW F  +   STIV EW+LVC+  +   L  +++F GV++G  + GQL D+FGRK +  + +      +    FS++FE+F  L   VG         ++VL  E+  K   ++  T+G   IF+A G + L   ++ I+DWR + +AL +P ++ +   W  PES  WLI++ + EEA+  + K ++  G  + +   D  + +   S +   H+   L++T NIR  T +   LW+  SVGY+GLSL    L GD ++N F+ +++E+ A+     +L+Y  RRY +      GG   +   ++      D +  AT L ++GKFG++A+F+ ++++T E +PTVVR +G+G     +R+G +++P  + LG Y    LPY++ GSL++L A+ T FLPE+FG  LP+TID++
Sbjct:   45 TPEHRCRVPDAANLSSAWRNHTVPLRLRDGREVPHSCRRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDRFGRKNVLFVTMGMQTGFSFLQIFSKNFEMFVVLFVLVGMGQISNYVAAFVLGTEILGKSVRIIFSTLGVC-IFYAFGYMVLPLFAYFIRDWRMLLVALTMPGVLCVALWWFIPESPRWLISQGRFEEAEVIIRKAAKANGIVVPSTIFDPSELQDLSSKKQQSHNILDLLRTWNIRMVTIMSIMLWMTISVGYFGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQYLPRRYSMATALFLGGSVLLFMQLVP----PDLYYLATVLVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYD-RFLPYILMGSLTILTAILTLFLPESFGTPLPDTIDQM 524
The following BLAST results are available for this feature:
BLAST of TCONS_00006808-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22A52.898e-8432.10Solute carrier family 22 member 5 OS=Homo sapiens ... [more]
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