TCONS_00006796-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006796-protein
Unique NameTCONS_00006796-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length474

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006796-protein ID=TCONS_00006796-protein|Name=TCONS_00006796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
DECSVITSPCHANAACTNTLGAFTCVCDDGFYGDGQQCSGILPNPPHLTS
NSYTVIIGNNTQLGEFVEEIKAISLDESGTVVQTSGVIETDDCNSAFTLF
LPTHSKSSFYIKLVKNATDVMDTCSIKLRFSTPTGAFVFADVFFVRRPYD
RPKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIATDHNF
GFFNITDSGSISLLKSLDYEQYTEFIFSIVAYDKIGDISSENTPVRILVA
NENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDALGEGNKDHQSTT
FGIVFRNDSNKFTMTQDGILTVNTALNYEAATSYKLSFLAYNLDGTQSSL
ADIYITILNANEHAPVFTQANYHWYINENNHPASFNDISATDIDGGVDEG
MSNIGYSLLTSTPVLTINPTSGLITLQQPLNYESISQYLFTVQASDGIFT
STANLHIHVLNLNDNDPVFGDDDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003798XLOC_003798Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006796TCONS_00006796Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR024731EGF_dom
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinPRINTSPR00205CADHERINcoord: 451..468
score: 41.27
coord: 365..378
score: 38.54
coord: 346..365
score: 24.22
coord: 259..288
score: 29.25
coord: 420..446
score: 30.48
IPR002126CadherinSMARTSM00112CA_2coord: 281..365
e-value: 1.2E-6
score: 38.1
coord: 181..257
e-value: 3.0E-7
score: 40.1
coord: 388..467
e-value: 9.6E-20
score: 81.6
IPR002126CadherinPFAMPF00028Cadherincoord: 264..356
e-value: 3.9E-9
score: 36.7
coord: 372..460
e-value: 1.6E-10
score: 41.2
coord: 159..249
e-value: 2.4E-12
score: 47.0
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 1..39
e-value: 2.4E-4
score: 30.4
IPR000742EGF-like domainSMARTSM00181egf_5coord: 2..39
e-value: 3.8E-4
score: 29.8
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1..39
score: 14.275
NoneNo IPR availableGENE3D2.60.40.60coord: 44..132
e-value: 0.19
score: 11.9
NoneNo IPR availableGENE3D2.10.25.10coord: 1..43
e-value: 1.1E-13
score: 50.8
NoneNo IPR availableGENE3D2.60.350.10coord: 142..266
e-value: 5.0E-20
score: 71.2
coord: 267..374
e-value: 2.1E-20
score: 72.4
NoneNo IPR availableGENE3D2.60.40.60coord: 375..470
e-value: 5.3E-22
score: 77.9
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 155..259
score: 17.828
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 368..469
score: 21.139
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 260..367
score: 19.253
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 263..363
e-value: 1.27406E-13
score: 65.7977
NoneNo IPR availableCDDcd00054EGF_CAcoord: 1..34
e-value: 2.15708E-8
score: 49.5574
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 158..255
e-value: 1.19584E-15
score: 71.5757
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 372..465
e-value: 1.498E-17
score: 76.9685
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 2..40
IPR024731EGF domainPFAMPF12947EGF_3coord: 3..38
e-value: 1.1E-9
score: 38.3
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 25..38
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 16..27
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 253..367
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 355..469
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 151..266

Blast
BLAST of TCONS_00006796-protein vs. Swiss-Prot (Human)
Match: CELR2 (Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens GN=CELSR2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.137e-32
Identity = 103/329 (31.31%), Postives = 153/329 (46.50%), Query Frame = 0
Query:  152 PKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIATDHNFGFFNITDSGSISLLKSLDYEQYTEFIFSIVAYDKIGDISSENTPVRILVANENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDALGEGNKDHQSTTFGIVFRNDSNKFTMTQD---GILTVNTALNYEAATSYKLSFLAYNLDGTQSSLADIYITILNANEHAPVFTQANYHWYINENNHPASFND--ISATDIDGGVDEGMSNIGYSLLTSTPVLTINPTSGLITLQQPLNYESISQYLFTVQASD-GI--FTSTANLHIHVLNLNDNDPVFGDD 472
            P F    +   V ES   G  +L V  I+ +A     + Y L    H+F F     +G IS+   LD E+   + F + A D      + +  V + V + ND+NP      Y V ++E   V T ++ VSA D DA       H   T+ I   N  N+F++T     G++++   L+Y+    Y L+  A   DGT+   A I + + +AN H PVF  ++Y   +NE + PA      ISATD D G +   + I Y +  S P   I+  +G +T Q  L+YE    Y   + A D GI   + T  L I V ++NDN P F  D
Sbjct:  503 PIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDA-------HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTAS--DGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE-DRPAGTTVVLISATDEDTGEN---ARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRD 818          

HSP 2 Score: 110.538 bits (275), Expect = 1.650e-25
Identity = 88/340 (25.88%), Postives = 166/340 (48.82%), Query Frame = 0
Query:  152 PKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIA--TDHNFGFFNITD-SGSISLLKSLDYEQYTEFIFSIVAYDKIGDISSENTPVRILVANENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDA---------LGEGNKDHQSTTFGIVFRNDSNKFTMTQDGILTVNTALNYEAATSYKLSFLAYNLD---GTQSSLADIYITILNANEHAPVFTQANYHWYINENNHP-ASFNDISATDIDGGVDEGMSNIGYSLLTSTP--VLTINPTSGLITLQQPLNYESISQYLFTVQASDGIFTSTANLH----IHVLNLNDNDPVF 469
            P+F   SY   V E+  AG  +  +  I+ +  +   + Y++ A     +  FF++   +G+++  + LD E  +  +F + A D      S    + ILV + NDH+PV +   Y  ++ E++ V  E+L V A+DGDA         L EG+    S  F I  R+          G++     ++ E   SY+L+  A +     G +S+ A +++++ + N++AP F++  Y   + E+  P A    ++A+D D G +   + + YS+++        ++  +G + +  PL+YE+  +Y   V+A DG     +N+     + VL++NDN P+F
Sbjct:  179 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRS----------GVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSN---AVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIF 505          

HSP 3 Score: 109.768 bits (273), Expect = 2.667e-25
Identity = 110/445 (24.72%), Postives = 189/445 (42.47%), Query Frame = 0
Query:   44 NPPHLTSNSYTVIIGNNTQLGEFVEEIKAISLDESGTVVQ--TSG------VIETDDCNSAFTLFLPTHSKSSFYIKLVKNATD--VMDTCSIKLRFSTPTGAFVFADVFFVRRPYDRPKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIATDHNFGFFNI-TDSGSISLLKSLDYEQYTEFIFSIVAYDKIGDISSENTPVRILVANENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDALGEGNKDHQSTTFGIVFRNDSNKFTMTQDGILTVNTALNYEAATSYKLSFLAYNLDG---TQSSLADIYITILNANEHAPVFTQANYHWYINENNHPA-SFNDISATDIDGGVDEGMSNIGYSLLTST--PVLTINPTSGLITLQQPLNYESISQYLFTVQASDGIFTSTANLHIHVLNLNDNDPVFGD 471
            N P  T   YTV +  +  +G  V  + A+  D    +    TSG       I +       +L LP   K      L   A+D    DT  I +  +                   RP F    Y   V+E   AG +++ ++  + +  +   I Y +   + +   F I  D+G+++    LDYE    +  +I A D      S+ T + ILV + ND+ P     +Y  ++ E +   T +L++SA+D D+   G       TF      D +    +  GI+     L+ E    Y L   AY +D       +  ++ +T+L+ N++ PVF Q  +  ++ EN+    +   ++ATD D G +   + I Y ++      V  ++  SG +T    L+YE   +Y+  +QA+     S A +H+ +L+ NDN PV G+
Sbjct:  606 NNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANT--------------HRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM---EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDS---GLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLR--AYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTN---AQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLGN 1025          

HSP 4 Score: 103.99 bits (258), Expect = 2.143e-23
Identity = 90/334 (26.95%), Postives = 157/334 (47.01%), Query Frame = 0
Query:  150 DRPKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIA--TDHNFGFFNITDSGSISLLKSLDYEQYTEFIFSIVAYDKIGDISSENTPVRILVANENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDALGEGNKDHQSTTFGIVFRNDS-NKFTMTQD-GILTVNTALNYEAATSYKLSFLAYNLDGTQSSLADIYITIL--NANEHAPVFTQANYHWYINENNHP-ASFNDISATDIDGGVDEGMSNIGYSLLTSTPVLTINPTSGLITLQQPLNYESISQYLFTVQASDGIFT---STANLHIHVLNLNDNDPVFGDDD 473
            + P F    Y   ++E A  G S++ V+ ++R+A     I Y + +  T + F   + +  G +SL   LDY+   +++ ++ A D       +   + + V + N H PV  +S Y V ++E     T ++ +SA+D D  GE  +     T+   F  DS  +F +  D G +T    L+YE   SY L+  A + +G        Y+ IL  + N++AP F + +Y   + E+  P  S   ISATD D G++  +               +  TSG++   + L+ E+++QY+    A D       +   + + VL++NDN PVF  D+
Sbjct:  606 NNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASD---GTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDT-GENAR----ITY---FMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARD-NGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDE 925          

HSP 5 Score: 103.219 bits (256), Expect = 3.611e-23
Identity = 87/326 (26.69%), Postives = 150/326 (46.01%), Query Frame = 0
Query:  152 PKFDLDSYATYVSESARAGDSILQVNIINRNATQREEIFYSLIATDHNFGFFNITDSGSISLLKSLDYEQYTEFIFSIVAYDK-IGDISSENTPVRILVANENDHNPVIDNSTYFVTISESIGVNTEILRVSASDGDALGEGNKDHQSTTFGIVFRNDSNKFTMTQDGILTVNTALNYEAATSYKLSFLAYNLDGTQ--SSLADIYITILNANEHAPVFTQANYHWYINENNH-PASFNDISATDIDGGVDEGMSNIGYSLLTSTP----VLTINPTSGLITLQQPLNYESISQYLFTVQASDGIFTSTANLHIHVLNLNDNDPVF 469
            P+F    Y   V E    G  +L+V   +R+      + YS+++ +    F+    +G++ ++  LDYE   E+   + A D     +S+ +  V + V + ND+ P+  ++ +  T+ ES+ +   +L V A D DA      +++    G  F    N  T    G ++V   L+ E    Y     A +  GT   ++ A + +T+L+ N++ P FTQ  Y   +NE+     S   +SA D D       S I Y + +        +T     GL++L  PL+Y+   QY+  V ASDG    TA + ++V + N + PVF
Sbjct:  397 PQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGT----GWISVAAELDREEVDFYSFGVEARD-HGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRD-----AHSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVF 712          
The following BLAST results are available for this feature:
BLAST of TCONS_00006796-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CELR29.137e-3231.31Cadherin EGF LAG seven-pass G-type receptor 2 OS=H... [more]
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