TCONS_00006783-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006783-protein
Unique Name	TCONS_00006783-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	580

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006783-protein ID=TCONS_00006783-protein|Name=TCONS_00006783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
MRDMNAAANIELVAGIDFGTTYSAYAYSYEYEQGKIFINSTWPSGVQTCK
EATAILFDENQRFVAFGEDAIDRYSDCADNDMEKKWYFFNRFKMSLYQEK
NGKNVNRNLMLSAANGKKMQGLKVFSGAINFLKDHLITNVNQRNAGNRIT
VDSVRWVLTVPAIWGDSAKQFMRESAQMAGIPSRNLIIALEPECASLYCQ
ELPAEKLGEFPDFKKAGAKYLLLDNGGGTVDVTVHQMLEGGRVKELYKAT
GGAWGGTKVDEAFVKYFRDMFTERVIDELKNQNAPDWIEMMRDFEQIKRK
ISNDNQDEHIRMMLRPCVQEVYQEIMELNLNTAFKNTADTKGAILNRHRL
QIPRSVISEMIERVSKSISAHTDFLMKQTGNDKLDFIVMVGGFSNSPIVV
KEVKDLVRGTLPVIVPENAELCVVQGAVIFGWKPDIFQSRKSKRTYGISM
VSTFREGIDPERHMFFDDENIKKCRLLFDKLCSVNEDIDLDQTMGRTYYP
VYNDQTEMNICVYESERNAVSYCDDEGARRLGLLNVPMQDLTGNKGRKVK
VNVRFGDTEFFVNGVDETTGADVKVKFDFL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003791	XLOC_003791	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006783	TCONS_00006783	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013126	Hsp_70_fam

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.420.40		coord: 229..414 e-value: 1.0E-18 score: 67.8
None	No IPR available	GENE3D	3.30.420.40		coord: 10..228 e-value: 1.5E-31 score: 109.6
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 217..304 coord: 350..431
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 12..199
IPR013126	Heat shock protein 70 family	PFAM	PF00012	HSP70	coord: 15..429 e-value: 9.8E-14 score: 50.4

Blast

[Close]

BLAST of TCONS_00006783-protein vs. Swiss-Prot (Human)
Match: HS12A (Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 7.110e-98
Identity = 196/627 (31.26%), Postives = 318/627 (50.72%), Query Frame = 0

Query:   12 LVAGIDFGTTYSAYAYSYEYEQGKIFINSTWP---SGVQTCKEATAILFDENQRFVAFGEDAIDRYSDCADNDMEKKWYFFNRFKMSLYQEKNGKNVNRNLMLSAANGKKMQGLKVFSGAINFLKDHLITNVNQRNAGNRITVDSVRWVLTVPAIWGDSAKQFMRESAQMAGIPS----RNLIIALEPECASLYCQELPAEKLGEFPD----------------FKKA----------------------------GAKYLLLDNGGGTVDVTVHQM-LEGGRVKELYKATGGAWGGTKVDEAFVKYFRDMFTERVIDELKNQNAPDWIEMMRDFEQIKRKISNDNQDEHIRMMLRPCVQEVYQEIMELNLNTAFKNTADTKGAILNRHRLQIPRSVISEMIERVSKSISAHTDFLMKQTGNDKLDFIVMVGGFSNSPIVVKEVKDLVRGTLPVIVPENAELCVVQGAVIFGWKPDIFQSRKSKRTYGISMVSTFREGIDPERHMFFDDENIKKCRLLFDKLCSVNEDIDLDQTMGRTYYPVYNDQTEMNICVYESERNAVSYCDDEGARRLGLLNVPMQDLTGNKG------RKVKVNVRFGDTEFFVNGVDETTGADVKVKFDFL 580
            +V  +DFGTT S YAYS+  E   I +   W     GV   K  T IL    ++F +FG  A D Y D   N+  K+W +  +FKM L+      ++  +  L+AANGKK++ L++F+ A+ + K+  +  ++ + AG+      VRWV+TVPAIW   AKQFMR++A  AG+ S      LIIALEPE AS+YC++L   ++ E                   F +A                            G KY+++D+GGGTVD+TVHQ+ L  G +KELYKATGG +G   VD  F K    +F E  I++ K +    W+++M  FE  KR  + D  +  + + L     + Y++    ++  A + +        ++  L++    ++ + +    SI  H   L ++     + F+ +VGGF+ +P++ + V+        +I+P++  L +++GAV+FG  P + + R+S  TYG+ +++ + EG  P   +   D   + C  +FDK  S ++ + L + + R+Y P    Q  + I +Y SE + VS+  D G ++ G L +   DLTG  G      R+++  ++FGDTE     +D  T   VKV  DFL
Sbjct:   57 VVVAVDFGTTSSGYAYSFTKEPECIHVMRRWEGGDPGVSNQKTPTTILLTPERKFHSFGYAARDFYHDLDPNEA-KQWLYLEKFKMKLH---TTGDLTMDTDLTAANGKKVKALEIFAYALQYFKEQALKELSDQ-AGSEFENSDVRWVITVPAIWKQPAKQFMRQAAYQAGLASPENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAAVNGYSGSDTVGAGFTQAKEHIRRNRQSRTFLVENVIGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLYKIFGEDFIEQFKIKRPAAWVDLMIAFESRKRAAAPDRTNP-LNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQAAFGDQCRIIIPQDVGLTILKGAVLFGLDPAVIKVRRSPLTYGVGVLNRYVEGKHPPEKLLVKD-GTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIVINIYSSEHDNVSFITDPGVKKCGTLRL---DLTGTSGTAVPARREIQTLMQFGDTEIKATAIDIATSKSVKVGIDFL 673

The following BLAST results are available for this feature:

BLAST of TCONS_00006783-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006783-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HS12A	7.110e-98	31.26	Heat shock 70 kDa protein 12A OS=Homo sapiens GN=H...	[more]

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TCONS_00006783-protein (polypeptide) - C. hemisphaerica