TCONS_00006731-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006731-protein
Unique NameTCONS_00006731-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length547

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006731-protein ID=TCONS_00006731-protein|Name=TCONS_00006731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MMDSAQFLIDYQDKVDSGGLDNAMRSIEDPKNVDYIMEYGWELVTCLCNQ
LEEEKNLNEEFVQFYFKCLNRVVEICKPKEILLAFNEKFRNIKSSKVLSD
AFKVTLKAFLKIERKQSLHLKDILETFGFAIKNIVSDTLENNNEDFLHVY
EEILKSIEQFLSGFVDLIGMRYLKDLTDFYAGRCLAHSEAWCRYEVKQCR
RMLLQFVFDFVELLSSDGVTIDDIHGIKDPLIGLLEVLHKLVSVFEELSD
LSSKDINNAKDKQCGKLVLLYLELHNGKGFPKVLSPEVVRSVIHGIVGIT
FERNSNLIIKLSLNLHDISLKLLKKESLNNDELEIGKDISMGLTKVMVWC
DQKDMRDASKRQFDILLTKFTLATRYSILKHLYDKSDHSSLRGYIIDVIN
NIFKKDAEETIPKSEIKRLSIHFLSFEQGENVLQESERLNASLNFIRFWM
LRDPKHVNKTGIWDNLEEITNKCKHIRNGVEVSIGEYHKFLQGGMKNGGV
ELELTIPGMEVLGNLQPDEKRMMVRRACLTMEMMLSVIIRILEISDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003772XLOC_003772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006731TCONS_00006731Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013877YAP-bd/ALF4/Glomulin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 30..247
e-value: 7.9E-4
score: 17.6
IPR013877YAP-binding/ALF4/GlomulinPFAMPF08568Kinetochor_Ybp2coord: 32..94
e-value: 7.3E-7
score: 27.9
coord: 312..489
e-value: 6.6E-7
score: 28.1

Blast
[Close]
BLAST of TCONS_00006731-protein vs. Swiss-Prot (Human)
Match: GLMN (Glomulin OS=Homo sapiens GN=GLMN PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.021e-17
Identity = 72/277 (25.99%), Postives = 129/277 (46.57%), Query Frame = 0 
Query:  280 FPKVLSPEVVRSVIHGIVGITFERNSNLIIKLSLNLHDISLKLLKKESLNNDELEIGK--DISMGLTKVMVWCDQKDMRDASKRQFDILLTKFTLATRYSILKHLYDKSDHSSLRGYIIDVINNIFKKDAEET------IPKSEIKRLSIHFLSFEQGE-NVLQESERLNASLNFIRFWMLRDPKHVNKTGIWDNLEEITNK-CKHIRNGVEVSIGEYHKFLQGGMKNGGVE--LELTIPGMEVLGNLQPDEKRMMVRRACLTMEMMLSVIIRILEI 544
             P VLSP  +     G + +  +R    +I   L L + SL  ++  SL    LEI     +  GL KVM  C  + +R  S     + + K     +Y++ + L + S+HS +  +II  I N      + T           I  L +     E  E ++LQ S+R+ ASLN +R+ +++D ++ N+TG+W  L  I N   K +  G+ +S   Y   ++   +    +    +T+ G E+  N+ P+ +  ++  A  T +++ SV+ R+ E+
Sbjct:  303 LPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKSFLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFIIQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRYLVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSITVSGEEI-PNMPPEMQLKVLHSALFTFDLIESVLARVEEL 578
The following BLAST results are available for this feature:
BLAST of TCONS_00006731-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLMN2.021e-1725.99Glomulin OS=Homo sapiens GN=GLMN PE=1 SV=2[more]
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