TCONS_00006493-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006493-protein
Unique Name	TCONS_00006493-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	485

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006493-protein ID=TCONS_00006493-protein|Name=TCONS_00006493-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
IASEIIKKNENYLSIENNQNLNSKMRDEVLGVDIGTTHTKCCLFTDGEFK
YESSLHNGYQEAGELSMYTHKEQNIGALVRSLDDCLSKFGNNLKVSRFVV
TGQMHGIVLWKPKIMEIINHETFTSLMNGCVKKHSNLITWEDQRCDEEFL
KSFPKSRCGNDVSTGYGLASLLWLQEAGKLEDYTMFGTIMDFIVWLLTQT
ERVYMTPHNAKSWGYFDEELMAWESEIFSGKIDPSLLPTILPVQQPIGMA
TVSCHGITKNHTVVYGALGDMQCAVRSCRPKGNEAVLNIGTSAQLSIIVD
KRSMVHQTISQNHSELQIVPYDQENVIVTAASLNGGNVLHQLATSLVSWM
TDLECQNVPSSSEVLIKFNQLQTDAGTSLLEISPTIFGERHDPKLSASVR
NIRPDNLSLGNIVAGMSRGIIENMFRMMSVDFLRKHDVQRIVGTGGALRA
SETLRGYVVEISGLELRMAEQTDASLGSMLFVQED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003685	XLOC_003685	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006493	TCONS_00006493	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018484	Carb_kinase_FGGY_N

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016773	phosphotransferase activity, alcohol group as acceptor

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.420.40		coord: 29..273 e-value: 9.5E-36 score: 123.3
None	No IPR available	GENE3D	3.30.420.40		coord: 274..481 e-value: 2.0E-8 score: 33.5
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 268..473 coord: 29..115
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 29..276
IPR018484	Carbohydrate kinase, FGGY, N-terminal	PFAM	PF00370	FGGY_N	coord: 29..275 e-value: 2.0E-13 score: 50.4

Blast

[Close]

BLAST of TCONS_00006493-protein vs. Swiss-Prot (Human)
Match: SHPK (Sedoheptulokinase OS=Homo sapiens GN=SHPK PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 3.773e-64
Identity = 153/472 (32.42%), Postives = 228/472 (48.31%), Query Frame = 0

Query:   26 RDEVLGVDIGTTHTKCCLFTDGE-----FKYESSLHNGYQEAGELSMYTH----KEQNIGALVRSLDDCLSKFGNN--LKVSRFVVTGQMHGIVLWKPKIMEIINHETFTSLMNGCVKKHSNLITWEDQRCDEEFLKSFPKSRCGNDVSTGYGLASLLWLQEAGK--LEDYTMFGTIMDFIVWLLTQTERVYMTPHNAKSWGYFDEELMAWESEIFSGKIDP-SLLPTILPVQQPIGMATVSCH---GITKNHTVVYGALGDMQCAVRSCRPKGNEAVLNIGTSAQLSIIVDKRSMVHQTISQNHSELQIVPYDQENVIVTAASLNGGNVLHQLATSLVSWMTDLECQNVPSSSEVLIKFNQLQTDAGTSLLEISPTIFGERHDPKLSASVRNIRPDNLSLGNIVAGMSRGIIENMFRMMSVDFLRKHDVQRIVGTGGALRASETLRGYVVEISGLELRMAEQTDASLGSML 480
            R   LG+D+GTT  K  L          F   +S     +    +         +EQ++  ++++L +CL+         V    V+GQMHG+V WK            T +     +  S+L+TW+D RC  EFL S P+ +    V+TG+G A++ WL +     L+ Y   GTI D++V +L    R  M+  NA SWGYF+ +  +W  E       P  LLP I    +P  +A  + H    I K  T V  ALGD+Q +V SC  +  +AVLNI TS QL+  +       QT     + +   PY     +  AASLNGGNVL      LV WM DL  +     S V  +  Q       + L I+PT+ GERH P   ASV  I   +LSLG++   + RGI++N+  M+ +  L+   V+R++G+G AL  ++ L+  V     L +   +  DA++G+ L
Sbjct:    4 RPITLGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQALHECLAALPRPQLRSVVGIGVSGQMHGVVFWKTGQGCEWTEGGITPVFE--PRAVSHLVTWQDGRCSSEFLASLPQPKSHLSVATGFGCATIFWLLKYRPEFLKSYDAAGTIHDYVVAMLCGLPRPLMSDQNAASWGYFNTQSQSWNVETLRSSGFPVHLLPDI---AEPGSVAGRTSHMWFEIPKG-TQVGVALGDLQASVYSCMAQRTDAVLNISTSVQLAASMPSGFQPAQTPDPT-APVAYFPYFNRTYLGVAASLNGGNVLATFVHMLVQWMADLGLEV--EESTVYSRMIQAAVQQRDTHLTITPTVLGERHLPDQLASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPIQQLQDWGVERVMGSGSALSRNDVLKQEVQRAFPLPMSFGQDVDAAVGAAL 466

The following BLAST results are available for this feature:

BLAST of TCONS_00006493-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006493-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SHPK	3.773e-64	32.42	Sedoheptulokinase OS=Homo sapiens GN=SHPK PE=1 SV=...	[more]

You are here

TCONS_00006493-protein (polypeptide) - C. hemisphaerica