Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00006313-protein ID=TCONS_00006313-protein|Name=TCONS_00006313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1372bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00006313-protein vs. Swiss-Prot (Human)
Match: ABCA2 (ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3) HSP 1 Score: 782.326 bits (2019), Expect = 0.000e+0 Identity = 378/713 (53.02%), Postives = 497/713 (69.71%), Query Frame = 0 Query: 628 IQLLTELDKIDYMAEGWQAVLKPMKLDLFYGFPNETMLNRYIQNRTRSNSGKTQFLSAVLFDNIEKNGRLPKHLHYRIRMDSRIMFPTANIREPFWRPGPLAGNSKYYYFGFAWMQDSLERAMIELMTGRNVSQPGLYIQEIPYPCYLGDNFLFMIQYIMPLCVVISFIYSVAILVQSIVYEKEQRLKEVMKMMGLSNTXSFIYSVAILVQSIVYEKEQRLKEVMKMMGLSNTVHWAAWFITSIVGMLTIVILLTIVLKTGHILPNSNSYIIFVFLTLAAIATIMFCFLISIFFSKAKLAAACGGIIYFVTYMPYIFISIQEGGSNHIDVSSNFKTVASLFSTTAFGLGARYFALFEQNGVGLQWSNLSMSPLEGDDFNMRKVFTMLLADTFIYAILVWYIESIHPGTYGIPRPWYFPFQLSYWFGPQASLDCEMD-CFKKSYKMAGNSEQNTAAL--------LAVETEPTHLKLGVAIKNLLKIYKKGSQPAIDHLSLNLYENQITSFLGHNGAGKTTTMSLLTGLFPSTSGTAYIYGKDIHTDMDSVRKSLGLCPQHNILYDRLTVEESLWFYARLKGMSDKKQVKYEIEKVLDDVGLSEKSNSFVDTLSGGMKRKLSVAIAFVGGSRTVILDEPTAGVDPYARRAIWELLEKYKDGRTILLSTHFMDEADILGDRIAIISHGKLRCVGSSLFLKTKFGDGYHLTLDKEP 1331 + LL +LD ID A GW + + +D+F GF +E + Y N+ ++ ++V+F K+G LP H+HY+IR +S T IR +WRPGP G Y+ +GF W+QD +ERA+I+ G +V +PG Y+Q PYPCY D+FLF+I+++MPLC+VIS+ +YSVA+ +Q IV EKE RLKEVMK MGL+N VHW AWFIT V + V LT +LK G +L +S+ II++FL + A+ATIMFCFL+S+ +SKAKLA+ACGGIIYF++Y+PY++++I+E + H +++ K +ASL STTAFGLG++YFAL+E GVG+QW S SP+EGDDFN+ TML+ D +Y IL WYIE++HPG YG+PRPWYFP Q SYW G + E + ++ +++ E A+ +E EPTHL L V + L K+YK + A++ LSLNLYENQ+ SFLGHNGAGKTTTMS+LTGLFP TSG+A IYG DI T+MD +RK+LG+CPQHN+L+DRLTVEE LWFY+RLK M+ +++++ E++K+++D+ LS K +S V TLSGGMKRKLSVAIAFVGGSR +ILDEPTAGVDPYARRAIW+L+ KYK GRTILLSTH MDEAD+LGDRIAIISHGKL+C GS LFLK +GDGY LTL K P Sbjct: 551 MALLQQLDTIDNAACGWIQFMSKVSVDIFKGFHDEESIVNYTLNQAYQDN--VTVFASVIFQT-RKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERAIIDTFVGHDVVEPGSYVQMFPYPCYTRDDFLFVIEHMMPLCMVISW----------------------------------VYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQVLMHSHVVIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVA-HDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAVTMLMVDAVVYGILTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWARTPRLSVMEEDQACAMESRRFEETRGMEEEPTHLPLVVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMA-QEEIRREMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRP 1224 HSP 2 Score: 191.815 bits (486), Expect = 5.866e-49 Identity = 101/236 (42.80%), Postives = 150/236 (63.56%), Query Frame = 0 Query: 1096 VAIKNLLKIYKK---GSQPAIDHLSLNLYENQITSFLGHNGAGKTTTMSLLTGLFPSTSGTAYIYGKDIHTDMDSVRKSLGLCPQHNILYDRLTVEESLWFYARLKGMSDKKQVKYEIEKVLDDVGLSEKSNSFVDTLSGGMKRKLSVAIAFVGGSRTVILDEPTAGVDPYARRAIWEL-LEKYKDGRTILLSTHFMDEADILGDRIAIISHGKLRCVGSSLFLKTKFGDGYHLTL 1327 V I+NL K+YK G A+D L L + + LG NGAGKT+T +LTG +T G A++ G + ++ V++SLG CPQ + L+D LT E L Y RL+G+S K + + ++ L+ + L++ ++ T SGG KRKLS AIA +G + LDEPT G+DP ARR +W L L+ K GR+++L++H M+E + L R+AI+ +G+LRC+GS LK +FGDGY +T+ Sbjct: 2050 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARV-VKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITV 2284 HSP 3 Score: 90.5077 bits (223), Expect = 4.892e-18 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 0 Query: 1 MAFANQLYLLLWKNYTLKKRKPLIFMAELTVPLVLFLILVIIRQHRPPDEASIATWAPLAMPSAGIVPLLQSFCPHRGYKKNGYLAFPGSKIELVIKDVADLANTP-LFDAIHG-----LKKFEEDFEDFQKNPSFS----NIRNIKDIKFSDLLKKDSDFVEYLERNLSMSSQMADAFMNATFNGSEISSIL 183 M F +QL LLLWKN TLK+R P + E+ +PLVLF IL+ +RQ +P A + + SAGI+P++QS CP + G+L + S + +++ + + LFD L+ + E P S + + + + + +L +NLS+ + A A + A + E+ +L Sbjct: 1 MGFLHQLQLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTISVKEAFYTAAPLTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLDRVVEEGNLFDPARPSLGSELEALRQHLEALSAGPGTSGSHLDRSTVSSFSLDSVARNPQELWRFLTQNLSLPNSTAQALLAARVDPPEVYHLL 193 The following BLAST results are available for this feature:
BLAST of TCONS_00006313-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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