TCONS_00006287-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006287-protein
Unique NameTCONS_00006287-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006287-protein ID=TCONS_00006287-protein|Name=TCONS_00006287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MGFSDILASLTDNPYFSAGFGLVGVGSGLAVLRKGAQAGFVLFRRHCMIT
LEVSNKDKSFDWVMQWMTQNKKNHMQHLSVSTLFHQHDSGKITTHFNYNP
SPGAHFIGYKNHWFRVERQRDNGMRDLATGIPWETITFTSVGRSKAIFTD
ILNESKELAISKQTGKTLMYIPMGAEWRQFGFPRQKRPLDSVILDENISE
EIVADIMDFIKNQAWYTRRGIPYRRGYLLHGPPGCGKSSFIMALAGELQY
NICVMNLGDRTLSDDRLNHLMSVAPQQSIILLEDIDAAFSRRDIVDGNKD
GGERGYYPNHVTFSGLLNCLDGVASTEERLVFMTTNHIDRLDPALIRPGR
IDVKKEIGHATPHQLYLMFRRFYPECSHDAAVRFSEDASKMKDDISVAQI
QGYFLLHKNSELDALKNVHLLGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003592XLOC_003592Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006287TCONS_00006287Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR014851BCS1_N
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0034551mitochondrial respiratory chain complex III assembly
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034551 mitochondrial respiratory chain complex III assembly
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 223..361
e-value: 1.5E-11
score: 54.4
IPR014851BCS1, N-terminalSMARTSM01024BCS1_N_2coord: 23..192
e-value: 1.2E-74
score: 264.0
IPR014851BCS1, N-terminalPFAMPF08740BCS1_Ncoord: 26..192
e-value: 7.2E-44
score: 149.9
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 228..358
e-value: 4.7E-20
score: 72.2
NoneNo IPR availableGENE3D3.40.50.300coord: 179..372
e-value: 6.5E-36
score: 123.5
NoneNo IPR availableCDDcd00009AAAcoord: 222..358
e-value: 2.75719E-10
score: 56.7707
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 329..347
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 159..411

Blast
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BLAST of TCONS_00006287-protein vs. Swiss-Prot (Human)
Match: BCS1 (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1)

HSP 1 Score: 493.812 bits (1270), Expect = 1.889e-174
Identity = 239/423 (56.50%), Postives = 316/423 (74.70%), Query Frame = 0 
Query:    1 MGFSDILASLTDNPYFSAGFGLVGVGSGLAVLRKGAQAGFVLFRRHCMITLEVSNKDKSFDWVMQWMTQNKKNHMQHLSVSTLFHQHDSGKITTHFNYNPSPGAHFIGYKNHWFRVERQRDNGMRDLATGIPWETITFTSVGRSKAIFTDILNESKELAISKQTGKTLMYIPMGAEWRQFGFPRQKRPLDSVILDENISEEIVADIMDFIKNQAWYTRRGIPYRRGYLLHGPPGCGKSSFIMALAGELQYNICVMNLGDRTLSDDRLNHLMSVAPQQSIILLEDIDAAFSRRDIVDGN--KDGGERGYYPNHVTFSGLLNCLDGVASTEERLVFMTTNHIDRLDPALIRPGRIDVKKEIGHATPHQLYLMFRRFYPECSHDAAVRFSEDASKMKDDISVAQIQGYFLLHKNSELDALKNVHLL 421
            M  SD + +L DNPYF AGFGLVGVG+ LA+ RKG Q G V FRRH MITLEV  +D+S+ W++ W+T++     QHLSV T + QH+SG+I+T F + PSPG HFI Y+  W RVER R+  M DL TG PWE++TFT++G  + +F +IL E++ELA+ ++ GKT+MY  +G+EWR FG+PR++RPL+SV+L + +++ IV D+ +FI N  WYT RGIPYRRGYLL+GPPGCGKSSFI ALAGEL+++IC+++L D +LSDDRLNHL+SVAPQQS++LLED+DAAF  RD+   N  K  G        +TFSGLLN LDGVASTE R+VFMTTNH+DRLDPALIRPGR+D+K+ +G+ +  QL  MF+RFYP  +   A  F+E   +  + IS AQ+QGYF+L+KN  + A+ N   L
Sbjct:    1 MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSYAWLLSWLTRHS-TRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSREMQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGL-----GRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESL 417
The following BLAST results are available for this feature:
BLAST of TCONS_00006287-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BCS11.889e-17456.50Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BC... [more]
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