TCONS_00006009-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006009-protein
Unique Name	TCONS_00006009-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1914

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006009-protein ID=TCONS_00006009-protein|Name=TCONS_00006009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1914bp
MNLLVVFVLFISYQCQAFDLPEPPEFANHPDTRISKWSGPYFNDEDQKRV
FQSLLHGRSANEGRRRAASDTLGFDPNRLFNPTVERPHRRRKPEGPEAMT
FEGNEAEAHPEDGVSPEEKLAHLVSKPIMEYAKDESENRGESRNYPGEPS
EERRHRDEGYGERRSEGGEGDDNERRERFEGNEGDRTDAEHFMEEKRRPE
NFREEEGRRRSERNYRIGAPGRKNLMMKDERQSFFPGLEHGHFYPSKNER
FSELYSRSRHQRGENNRKLIEQIRQYIKRSDLPKPYLNKRSKLMKSHSNT
IRRSHVRKRSHIKSKGKKSLITGKHQRSHVSKPRLIKLSAKRSKVEKEHN
KNKPTKRHSAKRSSVKESALKKRNSTAVHRDEITNHEENQSEVPGQESSN
FGNQFSESYRNKDSNNGNNGYSDGEYFGSDSPDTGDDSVAEAMHGANDDT
EQLIKSFANDKQFVKSLNGDFTSDGGKDVLLDSERIEGFDSHLLGGEGRH
RQGATRQAGGHRQHTVTAEQHHSIATDDAPEVDAALRGHHNPFYGPAPHG
TEMSFGYFNPHGISLTHNQRGEATDVYNGHYSNNIMSLDNLPEYKFEQSE
AANHIPVSPGDGEGHQLNTSPYFQNFIYPPNETPITNAHRPAATATSLHG
VHHQAPRISAHPGTFSTPIHHFDNPPNIGLHTHPAPILGMHSYAAPVVGL
PSHGYGTSYQIPVAGFNPHVASPAVLHPAPVHTIQQPRPQLVTFGYGHQY
ASNVGRPYLSQSTVEQNKVTQAVSQLIGKIAKEAESQKTAQTNLAQAVNT
AVQKIVDSKMKPTASNPAPGMAPPLAASGSPPAASGSPPAASGSPPAASG
SPPASLGAPPPASGLPPAVPMTQEVIDCDEEEECSRPSVPATTATVAELG
ANSPGLATSTGGSESSTTSKQESASQVGKVAGQAAASMAQKQGASQAQAG
AAATQAAAQTAAKTASANGVSPAQATAAAENAAMGTAGQTAGATSTDVSK
ATQGAIQTGATTSGNDDSPVQISTAIEASGATTAEEAKAAQSAAATVTET
GATTDDAVKAAQTAAQTVKQTGASAGQAAQVGVSTTQAAQEAEEDQQKAD
QQGGTVTEEGATEGQAQETANAQEAAPAAGAAGAGATGAATEGGAGALDA
GGGAGALNAGGDAAGALNAGGGAGILNAGGGAAGALNTGGGAAGALNAEG
GAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGA
LNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGG
GAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGA
LNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGG
GAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGA
LNAGGVTNTAGGTDVTDKLNGGADEAVGGNAAAQTANSKVRGGSEASTCP
NGQTDCRTEINDEWMPKGTGGPITSSQFKKVMSAFQVLNAPVPPALQIAE
LKAEVKEMQEKLNQQNSNEKQEISNFAADQPTTSSFTDQPKPITSSFADK
PKEESSSSLTDRPRGGVEPLSTFMDQGDFESPTGNSANHKEPTVSYIKQR
KHHPTHTFYKKKEPHYVQGVAKDKGTQADTPNGAAEVTMMIKKLGERAVK
ADPVYGQRFQRLQQLNLHQQSYLKDMLAATVKQFNTKQQLKKPDKEQFTV
EEILQLGHETDPGVQQAQLVSILRQMQREAGTAMANYWRRLQERPWNAQP
NANTYFIKNNPQNGEDNSEKLHDKSLMSQYHDSAKVAKPLTDRPLLKQRH
TTKELIDKLKSIKTGLKKAKLQKHKTASKKSKDSPTAAQDAYADLGSVSL
SDAIKTRKRNEVKM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003431	XLOC_003431	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006009	TCONS_00006009	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1548..1579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1578..1641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..514
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1062..1128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1866..1888
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 810..869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1483..1505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 900..1050

Blast

[Close]

BLAST of TCONS_00006009-protein vs. Swiss-Prot (Human)
Match: RRBP1 (Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4)

HSP 1 Score: 123.635 bits (309), Expect = 5.854e-28
Identity = 131/324 (40.43%), Postives = 132/324 (40.74%), Query Frame = 0

Query: 1155 GALNAGGDAAGALNAGGGA-GILNAGGGAAGALNTGGGAAGALNAEGGAAGALNAGGGAAGALNAGGGAAGA-----GASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGA-----GASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGA-----GASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGVTNTAGG 1462
            GA N G  A G  N G    G  N G  A G  N G  A G  N    A GA N G       N G    GA      A G  N      GA N G  A GA N G    GA N G  A GA      N G  A GA N G  A GA N G  A GA N G  A GA      N G  + GA N G    GA N G  A GA N G  A GA      A G  N G  A GA N G  A GA N G  A GA N G  A GA        G  N G  A GA N G  A GA N G  A GA N G    GA N G  T  A G
Sbjct:  214 GAPNQGRKAEGTPNQGKKTEGTPNQGKKAEGTPNQGKKAEGTPNQGKKAEGAQNQGKKVDTTPNQGKKVEGAPTQGRKAEGAQNQAKKVEGAQNQGKKAEGAQNQGKKGEGAQNQGKKAEGAQ-----NQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQ-----NQGKKSEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGQKGEGAQNQGKKTEGAQG 527

HSP 2 Score: 109.383 bits (272), Expect = 1.234e-23
Identity = 124/309 (40.13%), Postives = 131/309 (42.39%), Query Frame = 0

Query: 1133 GAGATGAATEG--GAGALDAGGGA-GALNAGGDAAGALNAGGGA-GILNAGGGAAGALNTGGGAAGALNAEGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGG---GAAGAGASGTLNAGGGAAGALNAGGGAAGALNAGGGAAGALNAGGGAAGAGASGTLNAGGGAAGALNAGGGAAGALNAG 1434
            G  A GA  +G  G GA + G  A GA N G  A GA N G  A G  N G  A GA N G  A GA N    + GA N G    GA N G  A GA      N G  A GA N G  A GA N G  A GA N G  A GA      N G  A GA N G  A GA N G    GA N G  A GA      N G  A GA N G  A GA N G    GA N G    GA G  A  + N G    GA   G  A    N G    G  N G  A G+ + G       A G+ N G  A  A N G
Sbjct:  309 GKKAEGAQNQGKKGEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKSEGAQNQGKKVEGAQNQGKKAEGAQ-----NQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQ-----NQGKKAEGAQNQGKKAEGAQNQGKKVEGAQNQGKKAEGAQ-----NQGKKAEGAQNQGKKAEGAQNQGQKGEGAQNQGKKTEGAQGKKAERSPNQGKKGEGAPIQGKKADSVANQGTKVEGITNQGKKAEGSPSEGK-----KAEGSPNQGKKADAAANQG 597

The following BLAST results are available for this feature:

BLAST of TCONS_00006009-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006009-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RRBP1	5.854e-28	40.43	Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP...	[more]

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TCONS_00006009-protein (polypeptide) - C. hemisphaerica