TCONS_00006005-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006005-protein
Unique NameTCONS_00006005-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length432

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006005-protein ID=TCONS_00006005-protein|Name=TCONS_00006005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
MAAIAGPSSSENVGDQIPIQVPVEQGETCFLYEPEFESLPLHIQSILKDL
QQELDDGDITDKGYQKRRTAIIAPFLKQYKPVVEESLKVELVEPSLEKLP
KTALNALSLLKEELDNEEITEKGYNKKRAKILEPYMLKEPSRASLPRAIQ
LKYQELDQELQDGDITDKGYRKKRMKLVHPYLEAVHPSSYRRSNSKKFSA
VKASVKQQRKGLQHEKHIMENGEKLFKCKVCGETFKQAQSYSGHCRLHRG
DHQKLYKCNMCNATYTTNSHLKYHMFKHTGDFPFTCTFCGKGFAGKSQLK
YHELRHTGDAPHSCDDCGTTFWKLKGLTDHKSKGCVSDRSSMEESNQGMS
SQNMIEMNNEESDRSDFEDAAEDEDDEPPSMTTPSTLHTFSALTSPSSES
SNSSNRYISLPQPDVTAALMKSKQTTFKAEES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003429XLOC_003429Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006005TCONS_00006005Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010506DMAP1-bd
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 357..377
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D2.20.28.30coord: 268..289
e-value: 2.0E-10
score: 40.2
NoneNo IPR availableGENE3D3.30.160.60coord: 310..324
e-value: 2.6E-5
score: 23.7
NoneNo IPR availableGENE3D2.10.69.10coord: 235..267
e-value: 4.6E-13
score: 48.7
NoneNo IPR availableGENE3D3.30.160.60coord: 325..389
e-value: 0.18
score: 11.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 256..278
e-value: 0.0013
score: 18.9
coord: 284..306
e-value: 0.0029
score: 17.9
NoneNo IPR availableGENE3D3.30.160.60coord: 195..234
e-value: 1.6E-4
score: 21.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..410
IPR010506DMAP1-binding domainSMARTSM01137DMAP_binding_2coord: 35..131
e-value: 2.3E-7
score: 40.5
coord: 141..241
e-value: 1.3E-10
score: 51.2
IPR010506DMAP1-binding domainPFAMPF06464DMAP_bindingcoord: 143..215
e-value: 1.7E-14
score: 54.4
coord: 37..79
e-value: 5.7E-11
score: 43.1
coord: 97..136
e-value: 6.5E-9
score: 36.5
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 284..306
e-value: 0.003
score: 26.8
coord: 312..332
e-value: 160.0
score: 2.6
coord: 256..278
e-value: 0.0062
score: 25.8
coord: 226..248
e-value: 0.018
score: 24.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 228..248
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 286..306
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 258..278
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 226..253
score: 11.988
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 284..311
score: 14.17
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 256..283
score: 12.757
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 221..274
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 264..321
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 290..309
e-value: 8.3E-13
score: 47.7

Blast
[Close]
BLAST of TCONS_00006005-protein vs. Swiss-Prot (Human)
Match: MYNN (Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.081e-24
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:  222 GEKLFKCKVCGETFKQAQSYSGHCRLHRGDHQKLYKCNMCNATYTTNSHLKYHMFKHTGDFPFTCTFCGKGFAGKSQLKYHELRHTGDAPHSCDDCGTTFWKLKGLTDHKSK 333
            GEK +KC++C + F Q      H R+H G+ +K YKC++CN  + T+S+LK H  KH+G+ P+ C  CG+ FA  S L YH  RHTG+ P+ CD CG  F     L  H  K
Sbjct:  354 GEKPYKCELCDKGFAQKCQLVFHSRMHHGE-EKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRK 464

HSP 2 Score: 94.7449 bits (234), Expect = 8.321e-21
Identity = 65/226 (28.76%), Postives = 104/226 (46.02%), Query Frame = 0 
Query:  164 DITDKGYRKKRMKLVHPYLEAVHPSSYRRSNSKKFSAVKASVKQQRKGLQHEKHIMENGEKLFKCKVCGETFKQAQSYSGHCRLHRGDHQKLYKCNMCNATYTTNSHLKYHMFKHTGDFPFTCTFCGKGFAGKSQLKYHELRHTGDAPHSCDDCGTTFWKLKGLTDHKSKGCVSDRSSMEES--NQGMSSQNMIEMNNEESDRSDFEDAAEDEDDEPPSMTTPSTL 387
            ++ DKG+ +K   + H  +       Y+        A  +++K     +   KH   +GEK + C  CG+ F QA + + H R H G+  K Y C+ C   +  +S L  H  KHTG+ P+ C  CGK F    +L  H   HTG+ P  C+ CG ++  +K L  HK+K       +++ S  +  +S Q+ I+ +            +E  D +P  MT P  L
Sbjct:  361 ELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLK-----IHARKH---SGEKPYVCDRCGQRFAQASTLTYHVRRHTGE--KPYVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICELCGNSYTDIKNLKKHKTKVHSGADKTLDSSAEDHTLSEQDSIQKS----------PLSETMDVKPSDMTLPLAL 566
The following BLAST results are available for this feature:
BLAST of TCONS_00006005-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYNN7.081e-2443.75Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1[more]
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