TCONS_00005935-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005935-protein
Unique NameTCONS_00005935-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length464

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005935-protein ID=TCONS_00005935-protein|Name=TCONS_00005935-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MSTWGQNQPLPPGWEAKYDPTSGRYFFINHQTKETTWNDPRVNYQQPAAT
GYGGGYQQQYGQQQQYGGYQQQAAAQPAAQPQQSTSTSQPRSSSAGTYQR
AQAATRTTTPVAREVETSLTEDSIMGDSVSSSEKQRILRSMKSKLNLFGV
TDDLILTTLDASSFDEDMAISVFESMGFKKKGAAQTTSAAKSTNNRWEVG
SSSRPARSKSPAKASTSTAAKSTTRAKSPTTSSTSSASASXTTRAKSPTT
SSTSSASASSSRTATATSSKTTTTPSKKTTTKKTTTTKSPTKKVTTTTND
STASDFDNIMAKINESMSSMSSKQSVLDKKASKTSGGDVSSLLNKKSSSQ
FKVKTTQQKRSPMPKKTAILSSATGLVQKLQPEGPDPSLVMGANSDELRA
DRLQTVGRDGSLARGAQRGLARGRERGLAHGKSYSSKGADTSLRCGPNYG
LAIGTQRSGMVTAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003376XLOC_003376Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005935TCONS_00005935Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 9..42
e-value: 4.8E-13
score: 59.3
IPR001202WW domainPFAMPF00397WWcoord: 10..40
e-value: 2.2E-14
score: 53.1
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 14..40
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 8..42
score: 18.362
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 7..43
NoneNo IPR availableGENE3D2.20.70.10coord: 6..41
e-value: 2.7E-15
score: 55.5
NoneNo IPR availableCDDcd00201WWcoord: 11..41
e-value: 1.79634E-11
score: 58.3082
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 43..103

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005935-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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