TCONS_00005920-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005920-protein
Unique NameTCONS_00005920-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005920-protein ID=TCONS_00005920-protein|Name=TCONS_00005920-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MDENRCSVIQGYTTADFNTNSKSSCKENSAPIEQTHQQQLHHMANGFVPS
FAIHQAQILPPPFPPNLSYPPKLYKESEYVRMFPPIGFSTVPLTIQAPLL
SHHKLAPPVLAVNGHINQENRAEPTSKKQKYDFSIKALTAKDENKPTRKP
LGLSNSANIQNNPMFMFQQLPPSEVCNKSNNKENVGQSPLSIKNRGRPSA
DVIELLKQRSIQSPHRYSCSVCHRSFPRKKSLDTHRLTHSDVKPYACDFP
GCTRKFKQSGQLKTHLRLHTGEKPFQCTFPDCESTFTHANRKCTMHPDHP
LRRISTESISEELLKNITSEETNENIDKIKIWFEKHFSNKDNTNDNKENI
PPNSIQPIIKAEPMNNEILECENYTEENNKRLLSAVALVELRDQMKNPSN
KKDNFSQLFTSHEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003371XLOC_003371Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005920TCONS_00005920Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 217..239
e-value: 0.0035
score: 26.6
coord: 245..269
e-value: 9.1E-4
score: 28.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 247..269
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 219..239
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 245..274
score: 15.396
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 217..244
score: 13.152
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 232..273
NoneNo IPR availableGENE3D3.30.160.60coord: 253..265
e-value: 1.9E-9
score: 36.9
NoneNo IPR availableGENE3D3.30.160.60coord: 230..252
e-value: 3.0E-11
score: 43.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 245..269
e-value: 4.4E-4
score: 20.4
coord: 217..239
e-value: 0.0027
score: 17.9
NoneNo IPR availableGENE3D3.30.160.60coord: 266..345
e-value: 1.2E-8
score: 34.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 15..229
e-value: 5.5E-5
score: 22.9

Blast
[Close]
BLAST of TCONS_00005920-protein vs. Swiss-Prot (Human)
Match: ZN367 (Zinc finger protein 367 OS=Homo sapiens GN=ZNF367 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.052e-35
Identity = 75/208 (36.06%), Postives = 109/208 (52.40%), Query Frame = 0 
Query:  195 RGRPSADVIELLKQRSIQSPHRYSCSVCHRSFPRKKSLDTHRLTHSDVKPYACDFPGCTRKFKQSGQLKTHLRLHTGEKPFQCTFPDCESTFTHANRKCTMHPDHPLRRISTESISEELLKNITSEETNENIDKIKIWFEKHFSNKDNTN-----------DNKENIPPNSIQPIIKAEPMNNEILECENYTEENNKRLLSAVALVEL 391
            RGRP AD +  L      S  R  C++C+R FPR+KSL  H+ TH+  +PY CD+P C + F QSGQLKTH RLHTGEKPF C+   C S FTHANR C   P HP  R+  E  ++ L K+  ++           W  +++  ++              D ++  P   +Q    ++  ++E    +   +E  +RL  A+AL+EL
Sbjct:  145 RGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHC---PKHPYARLKREEPTDTLSKHQAADNK-----AAAEWLARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQ----SDEEDDEKRGAQRRLQEQRERLHGALALIEL 340
The following BLAST results are available for this feature:
BLAST of TCONS_00005920-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3672.052e-3536.06Zinc finger protein 367 OS=Homo sapiens GN=ZNF367 ... [more]
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