TCONS_00005883-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005883-protein
Unique NameTCONS_00005883-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005883-protein ID=TCONS_00005883-protein|Name=TCONS_00005883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MMQFFLKTFLSILICKGAFAQVTGSAKSGCIGDINTLRNLHVNTPNLAWS
DTLATAAQSWAEHLAAQGELAHASNSERNGDGENLYQSKSIRSALCADAL
LAWYKEEANYNYITGSPTIEGKIIGHFTQVVWKGTKTFGVGIATKNVMSD
GDVLKETYIVARFSPAGNYDGQYVANVGQRKSGAITPSLHELEASVCTNL
KAAGWCGYFLDNASALQEYGGCSNAGVHQGCYKTCTGC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003357XLOC_003357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005883TCONS_00005883Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 97..112
score: 25.0
coord: 123..142
score: 50.0
coord: 47..65
score: 47.7
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 99..112
score: 32.18
coord: 158..171
score: 37.74
coord: 124..140
score: 47.93
coord: 47..65
score: 36.01
IPR014044CAP domainSMARTSM00198SCP_3coord: 25..171
e-value: 1.6E-18
score: 77.5
IPR014044CAP domainGENE3D3.40.33.10coord: 18..204
e-value: 4.0E-34
score: 117.5
IPR014044CAP domainPFAMPF00188CAPcoord: 34..145
e-value: 3.2E-16
score: 60.2
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 18..178
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 125..135
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 30..169
e-value: 5.18986E-42
score: 140.423

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005883-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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