TCONS_00005832-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005832-protein
Unique NameTCONS_00005832-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1800

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005832-protein ID=TCONS_00005832-protein|Name=TCONS_00005832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1800bp
MKCIFGSSFYPLFWAWLLALLLTGPILIDGRSYKGLTRPHSSPNEKNVKR
RSGIESNPVKSSAFQEVKIDTSKLYNELLKAIKKDKTPHVHQRQRGAVKS
NTKPSTSKRNEKHSPSIGYFMNLKQKAGKPSSNRQLIEYALPIQQQATND
PYWGSMGRPMETSPIISESVPISPTQAMFQSFNRVVSQNTPTIYLNPPPS
GGSSFETHSQQQTTKSITSNKPKTTKKETQIFHLPTPKPFVAVHHAPITK
TFEESKVSSSRETHLEKGGSKRVYSLGDNVFTDVGCYLDKWIRSIPTLEG
NHPLLMDSDYKTRSDPLQKCAEAALDKGLKLFAIQNGGQCFGGKTGESRY
NVYGTSDQCKEDGLGGSWANEVYSYRDDGVPKETKQIKQTVEKPKEEITQ
QSFLSSEEDEDQRLTRDNQIIEDFQGKQHNKEPSFKGALKNIMSKVSENK
KQSQAEKNIKIVKEIVKNLKAAKGEKEEPPPASVLTSKQTLDGEEFGRLG
DAIARGHKPPCICPDKICSSKLDLAFVIDAGAGSEQGGKEKMAETMEFGR
RVASAFKVTPEETRVGLITYATDAQVMMNFHRYADPDAIVEARDAVRVKP
HTGKYTGQALDLAKEGLFDSGHRADALDVAVLLTDGPSSDDVTLPARKLR
DMGVKIITVGIGPEVDRGQLNDIASDPDEEHVFTADYDSLATIIGRTQRA
ACVGGMLHEPVDKCKCNMYVKNDDKAEEELDKETAAFYNVYKTAVEASPR
DANAVKYNTIYRPWNKRGNQFYQAFPRHYYNGYISAMGHRRDNVAMLHKM
LPLLNPHPVMDASPLAELHHKVNSTSINVPSQRRTGNINKKLDLYEAKLK
ENAMEMYEKMQKSDKENGGDKQKGGKENNRDKQKFDKEKNGDNEESKKYD
GDNKHPQRMSNTEDRNDKQEKNGESEKKLKEVKDHSNEQEKGEENSRQGT
EEKNEGRFTQDEQQRESSQHFTQSPSNDNEQQRVNSFSNDVSWKGKGKFS
MGKWSNRLKGEKDEQEVADHEKLVSTGKNDEERNGEERKYTQQHQSKGED
HGYSHQEEGNREENRYPEESRFTQQHKHQADSKETDESPSKNGASDGELS
SKEKERLVFNYLKAHRHEFMKEDSQPSDHHGEGGGGEQSRPANMYQHEQD
NNQYGKGQQMYDERMGSNSEGKLHRADEEQVLADAKPLRQAGGSHELPFE
YVAQEEDKHHPTSESHGMENESESTQQRHKFHGEDERIGNEPMTREEMTE
EKYKNVFNNEDGTKNDRSKGGEQSKDGKKEDGKKNGELFTSEDKNKEKEK
DNEEDDDKYKSFQGFKFRYGPTESFNKQQDDKPKKLKKGKKIYPDDDSAP
QQSIKTKPSVGGANFGVSDFTGTGGGVGGNTGGMESDAPSKVSSHHEHEE
GTAPSPFEPEEKLSYHPTKEPGYSRFKDDQNREEERQPLSHQQNGMDKNT
SPYHSHEIQEKHGENEHQSVTNRESFASAPNESEAFSIGKHHHVKGYADS
HATFRIHNKKVEDITSKKSSPNHRYGGDESVQEQLEGGDHNGPGENVDKI
KVSDGEKDKEKKIKDNGNQIKYKHEENEEQKENEEKLFNSLKQSKDSNDE
KVGQFIDGERHSDNKDEKFVHDKPTKSWKFNDKNSDNMVEYEDHKHWKNP
KVGENEDSDSTEKYNERPKKFQDNEEAKQLHHLHEVRGNNDFDDNDETKA
GRFSDGPTHHQRGEDENENFSEESNQQQNEHEINRFSKEESRESKQDKQD
KDNERSEKFRGNGKTDKNDGSSSKEENESSQYHQKQRKGGEQKENEEASQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003328XLOC_003328Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005832TCONS_00005832Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1710..1730
NoneNo IPR availableCOILSCoilCoilcoord: 1574..1594
NoneNo IPR availableCOILSCoilCoilcoord: 452..472
NoneNo IPR availableCOILSCoilCoilcoord: 915..935
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 859..1492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1508..1800
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..60
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 522..683
e-value: 7.13277E-33
score: 126.252
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 521..702
e-value: 1.4E-29
score: 114.3
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 515..702
e-value: 2.0E-26
score: 92.6
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 523..686
e-value: 3.6E-30
score: 105.4
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 523..697
score: 24.253
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 503..699

Blast
BLAST of TCONS_00005832-protein vs. Swiss-Prot (Human)
Match: COCA1 (Collagen alpha-1(XII) chain OS=Homo sapiens GN=COL12A1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.993e-21
Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 0
Query:  518 CSSKLDLAFVIDAGAGSEQGGKEKMAETMEFGRRVASAFKVTPEETRVGLITYATDAQVMMNFHRYADPDAIVEARDAVRVKPHTG--KYTGQALDLAKEGLF--DSGHRADALDVAVLLTDGPSSDDVTLPARKLRDMGVKIITVGIGPEVDRGQLNDIASDPDEEHVF-TADYDSLATIIGRTQRAACVG 704
             S+  DL F++D   GS   G+      ++F   + SAF +  E+TRVG++ Y++D +   N ++Y   D   E   A++  P+ G    TG A+D   +  F   +G R     VA+++TDG S D+V +PAR+LR++GV++ ++GI    D  +L  IAS P   HVF  A++D++  I        C G
Sbjct:  135 VSAWTDLVFLVD---GSWSVGRNNFKYILDFIAALVSAFDIGEEKTRVGVVQYSSDTRTEFNLNQYYQRD---ELLAAIKKIPYKGGNTMTGDAIDYLVKNTFTESAGARVGFPKVAIIITDGKSQDEVEIPARELRNVGVEVFSLGIK-AADAKELKQIASTPSLNHVFNVANFDAIVDIQNEIISQVCSG 319          

HSP 2 Score: 88.9669 bits (219), Expect = 2.371e-17
Identity = 69/247 (27.94%), Postives = 112/247 (45.34%), Query Frame = 0
Query:  521 KLDLAFVIDAGAGSEQGGKEKMAETMEFGRRVASAFKVTPEETRVGLITYATDAQVMMNFHRYADPDAIVEARDAVRVKPHTG--KYTGQALDLAKEGLF--DSGHRADALDVAVLLTDGPSSDDVTLPARKLRDMGVKIITVGIGPEVDRGQLNDIASDPDEEHVFTA-DYDSLATIIGRTQRAACVGGMLHEPVDKCKCNMYVKNDDKAEEELDKETAAFYNVYKTAVEASPRDANAVKYNTIYR 762
            K D+ F++D   GS   G     +   F   +  +F+++P   ++ L+ Y+ D        ++   + I+EA   +   P+ G    TG+A+   +E +F    G R++   V +L+TDG SSD    PA KLR+  V+I  VG+   V R +L  IAS P E HVFT  D+D+   I     ++ C+   + + +   K   YV   D +  E+          Y      SP   N   Y+  Y+
Sbjct:  438 KADIVFLVD---GSYSIGIANFVKVRAFLEVLVKSFEISPNRVQISLVQYSRDPHTEFTLKKFTKVEDIIEA---INTFPYRGGSTNTGKAMTYVREKIFVPSKGSRSNVPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAV-RSELEAIASPPAETHVFTVEDFDAFQRISFELTQSICL--RIEQELAAIKKKAYVPPKDLSFSEVTS--------YGFKTNWSPAGENVFSYHITYK 667          

HSP 3 Score: 88.1965 bits (217), Expect = 4.455e-17
Identity = 63/219 (28.77%), Postives = 105/219 (47.95%), Query Frame = 0
Query:  491 LDGEEFGRLGDAIARGHKPPCICPDKICSSKL--DLAFVIDAGAGSEQGGKEKMAETMEFGRRVASAFKVTPEETRVGLITYATDAQVMMNFHRYADPDAIVEARDAVRVKPHTG--KYTGQALDLAKEGLF--DSGHRADALDVAVLLTDGPSSDDVTLPARKLRDMGVKIITVGIGPEVDRGQLNDIASDPDEEHVF-TADYDSLATIIGRTQRAAC 702
            L G+E   L D        P +     C ++   D+  ++D   GS   G+        F  R+   F + P+  ++ L  Y+ D +     + + D  ++++A   V   P+ G    TG AL+  ++  F   +G R  A  + VL+TDG S DDV  P++KL+D GV++  +GI    D  +L  IA+DPD+ H +  AD++SL+ I+       C
Sbjct: 1169 LVGQEMTTLSDTTVM----PILSSGMECLTRAEADIVLLVD---GSWSIGRANFRTVRSFISRIVEVFDIGPKRVQIALAQYSGDPRTEWQLNAHRDKKSLLQA---VANLPYKGGNTLTGMALNFIRQQNFRTQAGMRPRARKIGVLITDGKSQDDVEAPSKKLKDEGVELFAIGIK-NADEVELKMIATDPDDTHAYNVADFESLSRIVDDLTINLC 1376          
The following BLAST results are available for this feature:
BLAST of TCONS_00005832-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COCA11.993e-2133.33Collagen alpha-1(XII) chain OS=Homo sapiens GN=COL... [more]
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