TCONS_00005753-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005753-protein
Unique NameTCONS_00005753-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length683

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005753-protein ID=TCONS_00005753-protein|Name=TCONS_00005753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=683bp
KLSGTIFAYGQTGTGKTFTMEGVRSDPTMRGVIPNSFDHIFTHISRTQDQ
QYLVRASYLEIYQEEVKDLLSKDHKRKLELKERPDTGIYVKDLQSFVTKS
VKEIEHVMNVGNQNRAVGSTNMNEHSSRSHAIFVIYIECSEVGPDGETHI
RVGKLNMVDLAGSERQAKTGAKGDRLKEATKINLSLSALGNVISALVDGK
SSHIPYRDSKLTRLLQDSLGGNARTVMVANMGPASYNYEETITTLRYANR
AKNIKNKPKINEDPKDALLREFQEEIKRLQGELHRKGGSGGSGGSRRSRK
KRVQKEDGTYEEIEEEGGSGANQEEYMKEQQAKLAEEKQKLLENHGMVES
EKKRMIGEIDKRSNQLKKEREKVKSYTSKIKAMESKLLVGGKTILDKTTE
QEKALELRRKEILEQKKREREIAQRLEQEEENAVEIKENYSSLQQEVDVK
TKKLKKLFTKLQSTKQEIMDIQEEHIKERQSLETNLEELNQAIRLKKLII
ENFIPSITQEKVTKRAFYDAEQEVWKMKPLTTAQTTQQMAKRPVSAVGNK
RPISQYAKQAANASGNPRYKMENIISIELDMPTRTTRDYEGPAVAPRIQA
ALDAALQDEDDLTLDASALNNFNTKIKMKGKRGERPKTAKTMGPYRGAPT
GAGGGGRSARSAQGSSGGSSNELFPTARGLVKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003265XLOC_003265Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005753TCONS_00005753Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR019821Kinesin_motor_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..386
NoneNo IPR availableCOILSCoilCoilcoord: 395..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 629..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..332
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 120..137
score: 62.08
coord: 154..172
score: 61.71
coord: 1..22
score: 64.77
coord: 204..225
score: 71.74
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 1..262
e-value: 1.1E-119
score: 413.6
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 4..254
e-value: 4.5E-100
score: 334.7
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 1..268
e-value: 3.7E-114
score: 380.6
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 1..254
score: 108.976
IPR019821Kinesin motor domain, conserved sitePROSITEPS00411KINESIN_MOTOR_1coord: 153..164
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..286

Blast
[Close]
BLAST of TCONS_00005753-protein vs. Swiss-Prot (Human)
Match: KIF3B (Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1)

HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0
Identity = 423/619 (68.34%), Postives = 509/619 (82.23%), Query Frame = 0 
Query:    2 LSGTIFAYGQTGTGKTFTMEGVRSDPTMRGVIPNSFDHIFTHISRTQDQQYLVRASYLEIYQEEVKDLLSKDHKRKLELKERPDTGIYVKDLQSFVTKSVKEIEHVMNVGNQNRAVGSTNMNEHSSRSHAIFVIYIECSEVGPDGETHIRVGKLNMVDLAGSERQAKTGAKGDRLKEATKINLSLSALGNVISALVDGKSSHIPYRDSKLTRLLQDSLGGNARTVMVANMGPASYNYEETITTLRYANRAKNIKNKPKINEDPKDALLREFQEEIKRLQGELHRKG-GSGGSGGSRRSRKKRVQKEDGTYEEIEEEGGSGANQEEYMKEQQAKLAEEKQKLLENHGMVESEKKRMIGEIDKRSNQLKKEREKVKSYTSKIKAMESKLLVGGKTILDKTTEQEKALELRRKEILEQKKREREIAQRLEQEEENAVEIKENYSSLQQEVDVKTKKLKKLFTKLQSTKQEIMDIQEEHIKERQSLETNLEELNQAIRLKKLIIENFIPSITQEKVTKRAFYDAEQEVWKMKPLTTAQTTQQMAKRPVSAVGNKRPISQYAKQAANASGNPRYKMENIISIELDMPTRTTRDYEGPAVAPRIQAALDAALQDEDDLTLDASAL 619
             +GTIFAYGQTGTGKT+TMEG+R DP  RGVIPNSFDHIFTHISR+Q+QQYLVRASYLEIYQEE++DLLSKD  ++LELKERPDTG+YVKDL SFVTKSVKEIEHVMNVGNQNR+VG+TNMNEHSSRSHAIFVI IECSEVG DGE HIRVGKLN+VDLAGSERQAKTGA+G+RLKEATKINLSLSALGNVISALVDGKS+HIPYRDSKLTRLLQDSLGGNA+TVMVAN+GPASYN EET+TTLRYANRAKNIKNKP++NEDPKDALLREFQEEI RL+ +L ++  G       RR         +   EE EE    G ++++Y +EQQ KL  EK+ ++E+H +V  EK R++ E +K+   L++E++  +   +KIKAMESKLLVGGK I+D T EQ+K LE +R+EI EQK+REREI Q++E  +E  +E+KE YSSLQQEVD+KTKKLKKLF+KLQ+ K EI D+QEEHIKERQ LE    EL + ++LK LIIENFIP   + K+  RAF+D E++ WK+ P+T  +  QQM KRPVSAVG KRP+SQ+A+ +       RY+ ENI+ +ELDMP+RTTRDYEGPA+AP++QAALDAALQDED++ +DAS+ 
Sbjct:   88 FNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRSIGRRKRREKRREGGGSGGGGEEEEEEGEEGEEEGDDKDDYWREQQEKLEIEKRAIVEDHSLVAEEKMRLLKEKEKKMEDLRREKDAAEMLGAKIKAMESKLLVGGKNIVDHTNEQQKILEQKRQEIAEQKRREREIQQQMESRDEETLELKETYSSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQEEHIKERQELEQTQNELTRELKLKHLIIENFIPLEEKSKIMNRAFFDEEEDHWKLHPITRLE-NQQMMKRPVSAVGYKRPLSQHARMSMMIRPEARYRAENIVLLELDMPSRTTRDYEGPAIAPKVQAALDAALQDEDEIQVDASSF 705
The following BLAST results are available for this feature:
BLAST of TCONS_00005753-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF3B0.000e+068.34Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3... [more]
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