TCONS_00005478-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005478-protein
Unique NameTCONS_00005478-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1491

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005478-protein ID=TCONS_00005478-protein|Name=TCONS_00005478-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1491bp
MTQVLSPQSIDHVHLRLKKHAVKEQADATTITKKGTMEASTTFNPRAGGV
NKKLMRLAVDSRSSTKRNSIMFDESGAPPIKTEITLLNASVDEELIPCQS
IKHLSPDSGEELNSACNARFPKIEEMSHFHYAQVDFADKPVKIALSPVEK
DEINSFDPTQALTVEVSSKDKSWVVKRSQEDFVGLDRQIHRCLYDRRYSK
LPELKDLDEAGRLDENMVQQMQFYLSRFSELAGNNINCGPILNWLELDNH
GNHLVVMEADDSAINVPAVAAGRVIKRYQAQAPDEMSLEVGDFLSVIDMP
SSDETIWWRGKKGFEVGFFPSHCIEILNEREINDQILHHLQSRPVSKRRG
KFISFLRFFFKSRPSKDELMQHGILRERVFGCDLGERLALTGRDTPLVLD
LCAEVIEEHGIVDGIYRLSGIVSNLQKLRLSFDCDEQPPNLRDLKYLNDV
HCISSLLKTYFRELPNPLFTHELYDKFVIAIKKADDADRTVAFHHVIQRL
PPPHYRTMNKLLRHLNYCASKSDTTNMTAKNLAIVWAPNLLKPNSDDSVA
ALTEFRTQAIIVEYMIRNVDVFFDKNLASAAIAYYPEMKEQQSPQQQVQD
DSECIKLGLQNNSGPKLISLEEARQRIHKQRELTKSVSVDGATSSPRHSS
KLRGSFNPPKMSTAAPISPLPTLLSLEEAQARTNSNKSKTVPIPSGLTRS
EKGSISSDISTRELSGSVNSPRRTRKWFGLFSKASSKSSNIEDANENDLV
KASHSLYTKKTSPQISGPTRSQSEYRLHDIPRHPIQRSESFSSTSSADRT
SISADRTSISSLHNTAPIATPESEFEINLSDTDSMSLMSAIVSVRAKYMN
LDDGTTRYQSSTKTPLFSVGEPLNFRKLPDDELLIEPPATLEQTPPLESA
PPASISAPYSSHRRGAPSNDSGYLSQASTLNRGANSDGYLSSQASTLSRT
NTTSEQYGITPANTFSPERKSLRNSGRVKRNPSEDDVPIKRVRSLSPESY
VNMTAENVSRHESDSNEQEATSNTNSSDMPKQNNYVNIDDMDLNKVDTPV
TSELVTTRPSTLNVTSHCVNTSKIVDQKPSIKSSLESLKNPEIIDSKIFH
KAGPNSIMSRLSRSTSVGTATSPLDNRVNASPEKETVFGPRELFYQSKRE
KASEKSNSTPTTARQPGSPVRTPTRTHFSFTRSQSMTARRSTVNTPDSPH
SSNVSMDSTDGKVVMRSSVSKNRDEQRRSRRLSVRERAAMFGDVTSPNSP
NNSSWSELVDTNKNGDESCERTSSETSINDEIKSPVNKQSKNSHYVKSEN
EDPKVRSTSKRNFATDVSSRDFDLRCRVSDSIKSGNFPRYNSTSRLQSNS
IENLRNQNRNIVCRSTDRLVRSTYNRGIGNNEGATRPKSEILSRFDYRSF
DDKMNEQTRSYSVSTKNTESQDVFLSSKSENRLYGSDDYSAKQIGNFPLT
LRTGSGHNSQVSIDTPRGTRPRSLYENERRSYYDNITYEVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003109XLOC_003109Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005478TCONS_00005478Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR001452SH3_domain
IPR001683Phox
IPR008936Rho_GTPase_activation_prot
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 393..570
e-value: 9.2E-51
score: 184.6
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 396..546
e-value: 5.0E-41
score: 139.9
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 382..573
score: 42.917
IPR001452SH3 domainSMARTSM00326SH3_2coord: 270..328
e-value: 5.6E-8
score: 42.5
IPR001452SH3 domainPFAMPF14604SH3_9coord: 274..325
e-value: 3.5E-8
score: 33.1
IPR001452SH3 domainPROSITEPS50002SH3coord: 267..329
score: 12.041
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 270..330
NoneNo IPR availableGENE3D2.30.30.40coord: 272..335
e-value: 1.6E-11
score: 43.0
NoneNo IPR availableGENE3D1.10.555.10coord: 336..580
e-value: 1.4E-63
score: 214.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1451..1471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 680..720
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 891..1032
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1111..1311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..808
NoneNo IPR availableCDDcd11835SH3_ARHGAP32_33coord: 271..324
e-value: 1.30827E-30
score: 116.01
IPR001683Phox homologous domainPFAMPF00787PXcoord: 151..228
e-value: 2.4E-4
score: 21.0
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 147..247
e-value: 2.4E-4
score: 20.6
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 157..250
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 378..573

Blast
[Close]
BLAST of TCONS_00005478-protein vs. Swiss-Prot (Human)
Match: RHG32 (Rho GTPase-activating protein 32 OS=Homo sapiens GN=ARHGAP32 PE=1 SV=1)

HSP 1 Score: 506.138 bits (1302), Expect = 1.847e-150
Identity = 248/523 (47.42%), Postives = 339/523 (64.82%), Query Frame = 0 
Query:  118 ARFPKIEEMSHFHYAQVDFADKPVKIALSPVEKDEINSFDPTQALT--VEVSSKDKSWVVKRSQEDFVGLDRQIHRCLYDRRYSKLPELKDLDEAGRLDENMVQQMQFYLSRFSELAGNNINCGPILNWLELDNHGNHLVVMEADDSAINVPAVAAGRVIKRYQAQAPDEMSLEVGDFLSVIDMPSSDETIWWRGKKGFEVGFFPSHCIEILNEREINDQILHHLQSRPVSKRRGKFISFLRFFFKSRPSKDELMQHGILRERVFGCDLGERLALTGRDTPLVLDLCAEVIEEHGIVDGIYRLSGIVSNLQKLRLSFDCDEQPPNLRDLKYLNDVHCISSLLKTYFRELPNPLFTHELYDKFVIAIKKADDADRTVAFHHVIQRLPPPHYRTMNKLLRHLNYCASKSDTTNMTAKNLAIVWAPNLLKPNSDDSV-----AALTEFRTQAIIVEYMIRNVDVFFDKNLASAAIAYYPEMKEQQSPQQQVQDDSECI---KLGLQNNSGPKLISLEEARQRIHKQ 630
              FPK+ E +HFHY  V+F    ++++LS  + + + +   ++ L   V+++ + KSW+VKRS EDF  LD+ +H C+YDRR+S+L EL   D      E++ Q +  YLSR S +AGN INCGP L W+E+DN GNHL+V E  +S+IN PAV A  VIKRY A+APDE++LEVGD +SVIDMP    + WWRGK GF+VG FP HC+E++N++    Q + +   +PVSK+ GK I+FLR F KSRP+K +L Q GIL+ERVFGCDLGE L  +G + P VL  C   IE +GIVDGIYRLSG+ SN+Q+LR  FD  E  P+L    Y+ D+H + SL K YFRELPNPL T++LY+KF  A+  A D +R +  H VIQ+LPPPHYRT+  L+RHL+  A     TNM AKNLAIVWAPNLL+    +S      AA  E R Q+++VE+++ +VDV F   ++ A                 +Q+ +  +   K  L ++   KL++LEEA+ R   Q
Sbjct:  112 GHFPKMAECAHFHYENVEFGS--IQLSLSEEQNEVMKNGCESKELVYLVQIACQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLSELPRSDTLKDSPESVTQMLMAYLSRLSAIAGNKINCGPALTWMEIDNKGNHLLVHE--ESSINTPAVGAAHVIKRYTARAPDELTLEVGDIVSVIDMPPKVLSTWWRGKHGFQVGLFPGHCVELINQKV--PQSVTNSVPKPVSKKHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVDGIYRLSGVASNIQRLRHEFD-SEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRISMA-----------------MQEGAASLSRPKSLLVSSPSTKLLTLEEAQARTQAQ 610
The following BLAST results are available for this feature:
BLAST of TCONS_00005478-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG321.847e-15047.42Rho GTPase-activating protein 32 OS=Homo sapiens G... [more]
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