TCONS_00005409-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005409-protein
Unique NameTCONS_00005409-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length542

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005409-protein ID=TCONS_00005409-protein|Name=TCONS_00005409-protein|organism=Clytia hemisphaerica|type=polypeptide|length=542bp
LPLTMRSCLYPVFADNQTTRLIALWAVSIMSMFSATSGIKLGIRRMSQLC
FLTGALFTLIVAFSDNLWYLLNLAVQSIGYYFQYLISTSTFTSAFVQQRN
YPDGKQQEFDWMHKNTIFYWGWWLGWAPLVSIFATRISKGRTIKSVIEIA
FIIPSFVNFIWFVVVGGVSIDMENQAISMRLHCGMNKTTRDALGAPDWLH
SLGCIDEDKRFYMVIEKYEDIKIILQIIALMLTLLYFITSFDSAALVMGT
ISSNGLEEPPLIQRIFWCITIAACTSALIVYTEFTDRADVNAFAILAGLP
FAVLMCFCAISLWRLLKMEPYWFYNEVAHWEMIYGHIDDIQILKKVLLAI
VAPWYYLGQMAIKLSLNHHGDKNGNHVGEGHPPVSAQTTGSPPLSNQKRF
FAYFKFAFPFYLWIVLLLLQIRYQNINSVGWAVFVGFLVLSSRIRRALRR
QYRIQGNVFEDIAIMAIFPFTVVQMYRQVTFGERSIETGGRASRLNSDTT
EMKNNPSTKSNRGQRNLAYIQDESFSPESPPIYQSGEDFLAA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003082XLOC_003082Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005409TCONS_00005409Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000060BCCT_transptr
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000060BCCT transporter familyPFAMPF02028BCCTcoord: 13..318
e-value: 2.5E-64
score: 217.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..542

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005409-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top