TCONS_00005344-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005344-protein
Unique Name	TCONS_00005344-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	423

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005344-protein ID=TCONS_00005344-protein|Name=TCONS_00005344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MLELLKNMALNRGQIIVFGMTWVIYASSYLLRKPLGVIKTDLEAYYGLTP
TELGWLDTAFLLPYAFVAIMFGNLGDKYGNRNILVVSLLAMSFSMGSFGF
WDSPKVFAVLLFINGGAQAQLYCNIARFLTSWFDSSQKTTMFGMWGTAPF
AGGIIGTAVAVELQRRFSGDLKMMFLVPCVWIFFLAIATHFFLKFPHECG
MESPDPEKQQLKEDEPTAVQPKKALNFIETWKIKMVPELCWSMFGAKLVR
YCLYMWLPMYLAKALKYDKGYAGMFSTTFEIGGVFGSFCNGFYINRLMGG
RSYLGVFVAFATSGLSLYLFELTSTWSVFFNFIFLFMAGAANCGPDLVVS
GSLATEVAKAANAESAVAGLVNGFGSLGTIIEGPFIAFVMTQFGWSGAFY
SMVFLSLGASLAVGKAALAEYRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003037	XLOC_003037	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005344	TCONS_00005344	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR000849	Sugar_P_transporter
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 221..417 e-value: 4.8E-17 score: 61.4
None	No IPR available	GENE3D	1.20.1250.20		coord: 6..216 e-value: 2.5E-29 score: 101.6
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 22..352 e-value: 8.8E-33 score: 113.6
IPR000849	Sugar phosphate transporter	PIRSF	PIRSF002808	Hexose_phosphate_transp	coord: 5..419 e-value: 9.7E-61 score: 203.8
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 14..423 score: 15.993
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 18..413 e-value: 4.46553E-21 score: 91.2213
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 10..413

Blast

[Close]

BLAST of TCONS_00005344-protein vs. Swiss-Prot (Human)
Match: G6PT2 (Glucose-6-phosphate exchanger SLC37A1 OS=Homo sapiens GN=SLC37A1 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.665e-24
Identity = 122/483 (25.26%), Postives = 189/483 (39.13%), Query Frame = 0

Query:   17 VFGMTWVIYASSYLLRKPLGVIKTDLEAYYGL-------------------------TPTELGW--------------LDTAFLLPYAFVAIMFGNLGDKYGNRNILVVSLLAMS-----FSMGSFGFWDSPKVFAVLLFINGGAQAQLYCNIARFLTSWFDSSQKTTMFGMWGTAPFAGGIIGTAVAVELQRRFSGDLKMMFLVPCVWIFFLAIATHFFL-KFP-----------HECGMESP-------------------DPEKQ-QLKEDEPTAVQPKK-------------ALNFIETWKIKMVPELCWSMFGAKLVRYCLYMWLPMYLAKALKYDKGYAGMFSTTFEIGGVFGSFCNGFYINRLMGGRSYLGVFVAFATSGLSLYLFELTSTWSVFFNFIFLFMAGAANCGP----DLVVSGSLATEVAKAANAE--SAVAGLVNGFGSLGTIIEGPFIAFVMTQFGWSGAFYSMVF 404
            +F +T+++YAS +L RKP+ ++K +L  Y                              T+ GW              LD +FL  YA    + G +G++   R  L   +LA       F +G F    S   + V   ING  Q   + ++   L +WF   ++  + G+W +    G I+G+ +A        G   + F+VP   +  + I    FL + P           H  G E+                    DPE Q  L  D   ++ P               A++F    KI  V E    +  AKLV Y    WLP+Y+      D   AG  ST F++GG+FG    G   +RL    S  G+ +  A    +LY+F   S   +      L ++GA   GP       VS  L T  +   NA   S V  +++G GS+G  +    +A +++  GWS  FY ++F
Sbjct:   24 IFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWG---LSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAP--TLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGP-LLAGLLSPSGWSNVFYMLMF 500

The following BLAST results are available for this feature:

BLAST of TCONS_00005344-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
G6PT2	1.665e-24	25.26	Glucose-6-phosphate exchanger SLC37A1 OS=Homo sapi...	[more]

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TCONS_00005344-protein (polypeptide) - C. hemisphaerica