TCONS_00005228-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005228-protein
Unique NameTCONS_00005228-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005228-protein ID=TCONS_00005228-protein|Name=TCONS_00005228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MSNIAVARIQREFKEVIKSEEVANNAIKLDLLDDHYSHLRGRISGPPDTP
YEGGDYLLDIVIPETYPFNPPKVKFITKIWHPNISSVTGAICLDILKDQW
AAAMTLRTVLLSIQALLASPEPDDPQDAVVAKQYKEEQPAFIKTARHWTA
TYAGGKTGGDECQDKIKQLMDMGFDEQNSRTALSTHSWNVEQAIESLFK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002971XLOC_002971Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005228TCONS_00005228Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..154
e-value: 1.7E-62
score: 223.6
NoneNo IPR availableGENE3D1.10.8.10coord: 164..199
e-value: 2.4E-11
score: 42.9
NoneNo IPR availableCDDcd14391UBA_II_E2_UBCD4coord: 164..198
e-value: 8.15899E-16
score: 67.3256
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 162..199
e-value: 6.7E-7
score: 38.9
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 163..197
e-value: 2.4E-7
score: 30.4
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 160..199
score: 12.499
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..163
e-value: 4.1E-53
score: 178.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..153
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..148
e-value: 6.8E-43
score: 145.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 7..143
score: 37.52
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 8..149
e-value: 2.11834E-62
score: 191.647
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 80..96
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 131..198

Blast
[Close]
BLAST of TCONS_00005228-protein vs. Swiss-Prot (Human)
Match: UBE2K (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 2.349e-90
Identity = 135/198 (68.18%), Postives = 155/198 (78.28%), Query Frame = 0 
Query:    1 MSNIAVARIQREFKEVIKSEEVANNAIKLDLLDDHYSHLRGRISGPPDTPYEGGDYLLDIVIPETYPFNPPKVKFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSIQALLASPEPDDPQDAVVAKQYKEEQPAFIKTARHWTATYAGGKTGGDECQDKIKQLMDMGFDEQNSRTALSTHSWNVEQAIESLF 198
            M+NIAV RI+REFKEV+KSEE + N IK+DL+D++++ LRG I+GPPDTPYEGG Y L+I IPETYPFNPPKV+FITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLS+QALLA+ EPDDPQDAVVA QYK+    F +TAR W   YAG      E   KI+ L  MGFD      ALS+ SW+VE A E L 
Sbjct:    1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLL 198
The following BLAST results are available for this feature:
BLAST of TCONS_00005228-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBE2K2.349e-9068.18Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens ... [more]
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