TCONS_00005141-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005141-protein
Unique Name	TCONS_00005141-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	344

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005141-protein ID=TCONS_00005141-protein|Name=TCONS_00005141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
MSSQQKDEQVLEQTEQIWRFLDEMSLKDPKEYETFIQKVLKDGENENMGP
PIPSFVVQTEKVPQVIPIRKYFINFTKWHQLPKPENETSPVAMTTSNIRK
EIIDKEWAYIIDVTLNPEVYPSDTSPNQLQRCALVELVFRHIESKHSLQF
SRKFEFCEEKYIGNRDSLLDFICPSAVKNKLNNALNGTENNLTLDQIRNL
SKGKENNKIVTGNQTKSGMSKKSQPTPASVETIKTSSGESVDSMKELKTK
TLGSHHGNKTRLPAPKVEMMVNKDGGNIELRIELPKVDSVAECDLEITEN
CVMLEVPQKYKLDFTFPLKVDFDEANAKFIKDRKVLLIIAPIDK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002932	XLOC_002932	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005141	TCONS_00005141	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR012981	PIH1_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 249..343 e-value: 7.7E-9 score: 35.1
IPR012981	PIH1 domain	PFAM	PF08190	PIH1	coord: 29..342 e-value: 1.0E-19 score: 71.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..243

Blast

[Close]

BLAST of TCONS_00005141-protein vs. Swiss-Prot (Human)
Match: PIHD2 (PIH1 domain-containing protein 2 OS=Homo sapiens GN=PIH1D2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.204e-32
Identity = 86/338 (25.44%), Postives = 158/338 (46.75%), Query Frame = 0

Query:   10 VLEQTEQIWRFLDEMSLKDPKEYETFIQKVLKDGENENMGPPIPSFVVQTEKVPQVIPIRK-YFINFTKWHQLPKPENETSPVAMTTSNIRKEIIDKEWAYIIDVTLNPEVYPSDTSPNQLQRCALVELVFRHIESKHSLQFSRKFEFCEEKYIGNRDSLLDFICPSAVKNKLNNALNGTENNLTLDQIRNLSKGKENNKIVTGNQTKSGMSKKSQPTPASVETIKTSSGESVDSMKELKTKTLGSHHGNKTRLPAPKVEMMVNKDGG----NIELRIELPKVDSVAECDLEITENCVMLEVPQKYKLDFTFPLKVDFDEANAKFIKDRKVLLIIAPI 342
            +L Q  Q W  LD+++  DP+ YE FIQ+ LK+G+     P  P   +QT  +    P  K  FIN  +W ++P P++ T PV +T           +   +IDV  NP+V  +    +Q+++  L+++  + IE K     S  +                       K ++  ++   + NL   Q  ++   ++  + +T  Q +S         P  +      SG++V  ++E+ +  +      +  +  P  E+ +  D       IEL++ELP ++SV+ CDL ++E+ +++EV +KY+L    P  +D +   AKFIK++  L+I  P+
Sbjct:    8 LLTQVTQFWNLLDDLAQSDPEGYEKFIQQQLKEGKQLCAAPE-PQLCLQTRILK---PKEKILFINLCQWTRIPAPQSTTHPVPLTVGKPEDTTEISDAYTVIDVAYNPDVLHA-AEKDQVKKNQLIQMAMKCIEEKFQFTLSHSYHI--------------------TKFRIKGSIQRMKQNLMGIQTDSIDLREKMRRELTLGQIRSSTMSNPDHFPQLLLPKDQVSGKAVCLIEEISSTEI------QVEMKMPAYELKIVHDHSEKPLKIELKVELPGINSVSLCDLSVSEDDLLIEVSEKYRLHLNLPKLIDTEMTTAKFIKEKSTLIITMPL 314

The following BLAST results are available for this feature:

BLAST of TCONS_00005141-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005141-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIHD2	5.204e-32	25.44	PIH1 domain-containing protein 2 OS=Homo sapiens G...	[more]

You are here

TCONS_00005141-protein (polypeptide) - C. hemisphaerica