TCONS_00005023-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005023-protein
Unique Name	TCONS_00005023-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	425

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005023-protein ID=TCONS_00005023-protein|Name=TCONS_00005023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MAAQRPKKNNSPINVKHQPLKATVPLSSLVRNTSPTRRRTSPSSPGLPVD
KRNKYRRSPDVNTNGESRNLFSPLGSKVNLFKPVASKGKNIRRTNSLETL
SSSYINGQWPRESGSAQQQVSIGSGICRSTQTQWDSDSEENPLPPTTYEH
RKPQTINGSSKEVFKQHLQRSKQQSSTHIQHGKQSPLQGDHSTFSQYYPT
AYSQSKPVPIPQIPSSPKNPMHTRKSVEGLNIELAGLELEDKVADQVFAR
TPPDGHRPPVPGQYTPKSDVKNVDTQTVNSWMDVLASLSPNNTRDKRSSS
ISSISPGFAISPAPTDNNTLSPNHDSSNNTSPTKPVSSLNLEPQTEDVSH
VPKYASSPKPNNSFMFARGPPDGAEKVPLSLDEIESDAKEENRNSCPDKS
KMNFQCSTNSAFSEILIQRCAKKVS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002848	XLOC_002848	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005023	TCONS_00005023	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026642	Glcci1/FAM117

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026642	Glucocorticoid-induced transcript 1/FAM117	PFAM	PF15388	FAM117	coord: 91..416 e-value: 2.0E-52 score: 178.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..195

Blast

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BLAST of TCONS_00005023-protein vs. Swiss-Prot (Human)
Match: F117B (Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.341e-29
Identity = 110/340 (32.35%), Postives = 154/340 (45.29%), Query Frame = 0

Query:   94 TNSLETLSSSYINGQWPRESGSAQQQVSIGSGICRSTQTQWDSDSEENPLPPTTYEHRKPQTINGSS--KEV--FKQHLQRSKQQSSTHIQHGKQSPLQGDHSTFSQYYPTAYSQSKPVP----IPQIPSSPKNPMHTRKSVEGLN--IELAGLELEDKVADQVFARTPPDGHRPPVPGQYTPKSDVKNVDTQTVNSWMDVLASLSPNNTRDKRSSSISSIS------PGFAISPAPTDNNTLSPNHDSSNNTSPTKPVSSLNLEPQTEDVSHVPKYASSPKPNNSFMFARGPPDGAEKVPLSLDEIESDAKEENRNSCPDKSKMNFQCSTNSAFSEILI 417
            T+SL+TL++ Y+ G WPR+S    Q           T++ W  +  E         H++  +   +   KE+   +Q LQRSK  S  H    +QSP  G+H+  +Q          PVP    IP IP +       R SVEGLN  IE+   E  +K  +Q+  +  PDGHR P P      S  +++DTQT        A    NN+   RS S+S  S       G   SP   D+  + P    + N SP                  +PKYA+SPKPNNS+MF R PP+G E+V +  +       E     CPDK+K+NF   + SAF  + I
Sbjct:  218 TSSLDTLAAPYLAGHWPRDSHG--QAAPCMRDKATQTESAWAEEYSEK----KKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQ-------APVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEK-EEQLIPQDIPDGHRAPPP-LVQRSSSTRSIDTQTPGG-----ADRGSNNS--SRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSP------------------LPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSI 517

The following BLAST results are available for this feature:

BLAST of TCONS_00005023-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005023-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F117B	1.341e-29	32.35	Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV...	[more]

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TCONS_00005023-protein (polypeptide) - C. hemisphaerica