TCONS_00004962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004962-protein
Unique NameTCONS_00004962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length623

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004962-protein ID=TCONS_00004962-protein|Name=TCONS_00004962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=623bp
MSESDHDYALVVMLNESESTGDRLTFTVQKVNQADLDPEQTRVAIIENEG
VQTKIALPTSLVAPLPEGDEDTTTYLQNVVLQGLESVAKVKPDCIESLEE
SSNNINIVLQENEEPSEVEKSAEDKDGENGQNNDENDDGKENNTESYIFE
DLSVIQNMLSSLKDKGSKEDATYPVEIEGEPVPVCIQLSEEAEIKSEDDE
TIEKMICEEAEPKFTKLFKCNACDSTYTTKYSLNIHARIHTGDKPFKCTE
CDASFIRRSYLKYHMQNHTGVKLYQCTMCEMSYTSGSSLKNHLRSHTGEK
PYKCTDCGEAFPRKAYLNHHQIIAHQCSMPYKCDKCDKVYKTKSSLRMHA
KTHITPDENHPNQCKDCKKTFTRQHDLKRHVLSVHEKASHKCDICGTCYT
AKASLVIHMRSHTGEKPFACDLCDAKFARNTYLKTHKLTHQAKKPLTCEV
CGTGFTVMSSLTQHMLRHNGEKPFACDVCDAKFFRQRSVVEHRRVHTGEK
PYSCQLCDKKFAWRCDMRRHKKFHQNEDMNSKKEDVNENNESAMDEDESP
VQSDEEKIIQDMQEQVEASIEINFTDSTQEEDEDDRLECDEQDESVVEET
QIFAALDPNEKEQTPTITDTEAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002810XLOC_002810Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004962TCONS_00004962Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 526..546
NoneNo IPR availableGENE3D2.30.30.380coord: 265..280
e-value: 5.3E-6
score: 26.0
coord: 229..247
e-value: 3.4E-10
score: 39.4
NoneNo IPR availableGENE3D3.30.160.60coord: 371..387
e-value: 8.5E-5
score: 22.0
NoneNo IPR availableGENE3D3.30.160.60coord: 412..428
e-value: 1.2E-12
score: 47.2
coord: 187..228
e-value: 1.0E-6
score: 28.3
coord: 295..321
e-value: 1.2E-13
score: 50.4
NoneNo IPR availableGENE3D3.30.160.60coord: 344..370
e-value: 6.0E-11
score: 42.0
coord: 457..480
e-value: 4.5E-14
score: 52.1
NoneNo IPR availableGENE3D3.30.160.60coord: 429..456
e-value: 1.9E-16
score: 59.4
NoneNo IPR availableGENE3D3.30.160.60coord: 322..343
e-value: 2.0E-6
score: 27.2
NoneNo IPR availableGENE3D2.20.25.10coord: 495..509
e-value: 5.7E-6
score: 25.8
NoneNo IPR availableGENE3D3.30.160.60coord: 510..538
e-value: 6.2E-6
score: 25.6
NoneNo IPR availablePFAMPF12874zf-metcoord: 418..436
e-value: 0.0039
score: 17.4
coord: 274..297
e-value: 3.7E-4
score: 20.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 390..412
e-value: 3.6E-4
score: 20.7
coord: 331..353
e-value: 4.3E-5
score: 23.6
coord: 447..468
e-value: 0.0025
score: 18.1
coord: 218..240
e-value: 0.0075
score: 16.6
coord: 246..268
e-value: 2.1E-4
score: 21.5
coord: 363..385
e-value: 1.0E-4
score: 22.4
coord: 302..325
e-value: 4.1E-5
score: 23.7
NoneNo IPR availableGENE3D3.30.160.60coord: 481..494
e-value: 1.7E-10
score: 40.2
coord: 281..294
e-value: 1.1E-10
score: 40.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 526..623
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 474..496
e-value: 0.025
score: 23.7
coord: 446..468
e-value: 0.014
score: 24.5
coord: 418..440
e-value: 0.079
score: 22.1
coord: 502..524
e-value: 0.018
score: 24.2
coord: 390..412
e-value: 0.0054
score: 26.0
coord: 302..325
e-value: 0.006
score: 25.8
coord: 218..240
e-value: 0.014
score: 24.6
coord: 246..268
e-value: 8.1E-4
score: 28.7
coord: 331..353
e-value: 2.7E-4
score: 30.3
coord: 274..296
e-value: 0.0013
score: 28.0
coord: 362..385
e-value: 0.011
score: 24.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..440
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 304..325
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 392..412
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 504..524
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 276..296
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 333..353
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 476..496
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 248..268
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 448..468
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 220..240
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 390..417
score: 14.627
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 274..301
score: 15.189
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 502..529
score: 11.863
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 331..358
score: 11.697
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 362..390
score: 10.159
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 418..445
score: 12.653
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 474..501
score: 14.586
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 246..273
score: 12.965
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 446..473
score: 13.713
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 218..245
score: 14.274
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 302..330
score: 12.424
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 468..520
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 254..311
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 330..381
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 399..455
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 216..268
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 248..264
e-value: 4.6E-12
score: 45.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 388..411
e-value: 7.1E-11
score: 41.5

Blast
BLAST of TCONS_00004962-protein vs. Swiss-Prot (Human)
Match: ZNF45 (Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=1 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 9.771e-79
Identity = 132/313 (42.17%), Postives = 180/313 (57.51%), Query Frame = 0
Query:  216 KLFKCNACDSTYTTKYSLNIHARIHTGDKPFKCTECDASFIRRSYLKYHMQNHTGVKLYQCTMCEMSYTSGSSLKNHLRSHTGEKPYKCTDCGEAFPRKAYLNHHQIIAHQCSMPYKCDKCDKVYKTKSSLRMHAKTHITPDENHPNQCKDCKKTFTRQHDLKRHVLSVHEKASHKCDICGTCYTAKASLVIHMRSHTGEKPFACDLCDAKFARNTYLKTHKLTHQAKKPLTCEVCGTGFTVMSSLTQHMLRHNGEKPFACDVCDAKFFRQRSVVE-HRRVHTGEKPYSCQLCDKKFAWRCDMRRHKKFHQNE 527
            K +KCNAC  +++    LNIH RIHTG+KP+KC EC   F   S+L+ H  +HTG K Y+C  C   +   S+L +H R HTGEKPY+C  CG+ F R +  N H    H    PYKC++C K +   S+L  H + H       P +C  C K F+R  DL  H      +  +KC+ CG  ++  +SL +H R HTGEKP+ C  C   F+  + L+ H+  H  +KP  CE CG GF   S+   H   H GEKP+ CDVC  K FRQRS ++ H+RVHTGE+PY C+ C K F+W   ++ H++ H  E
Sbjct:  330 KPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIH-FRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEK---PYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVC-GKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSWSSYLQAHQRVHTGE 637          

HSP 2 Score: 212.231 bits (539), Expect = 5.318e-60
Identity = 112/312 (35.90%), Postives = 169/312 (54.17%), Query Frame = 0
Query:  216 KLFKCNACDSTYTTKYSLNIHARIHTGDKPFKCTECDASFIRRSYLKYHMQNHTGVKLYQCTMCEMSYTSGSSLKNHLRSHTGEKPYKCTDCGEAFPRKAYLNHHQIIAHQCSMPYKCDKCDKVYKTKSSLRMHAKTHITPDENHPNQCKDCKKTFTRQHDLKRHVLSVHEKASHKCDICGTCYTAKASLVIHMRSHTGEKPFACDLCDAKFARNTYLKTHKLTHQAKKPLTCEVCGTGFTVMSSLTQHMLRHNGEKPFACDVCDAKFFRQRSVVEHRRVHTGEKPYSCQLCDKKFAWRCDMRRHKKFHQNE 527
            K +K   C  +++    L I+ R H G+KP+KC +CD +F R S L+ H + H+  K Y       S++  S L +H R  TGE PYK  +CG    + ++     +I H    PYKC++C   +  +S L++H K H       P +C++C K+F+ +  L+ H      +  +KC+ CG  ++  + L IH R HTGEKP+ C+ C   F+  ++L+ H+++H  +KP  CE CG GF   S+L  H   H GEKP+ CD C   F R      H RVHTGEKPY C+ C K F+   ++  H++ H  E
Sbjct:  162 KPYKGEHCVKSFSWSSHLQINQRAHAGEKPYKCEKCDNAFRRFSSLQAHQRVHSRAKSYTNDASYRSFSQRSHLPHHQRVPTGENPYKYEECGRNVGKSSHCQA-PLIVHTGEKPYKCEECGVGFSQRSYLQVHLKVHTGKK---PYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGE 469          

HSP 3 Score: 211.075 bits (536), Expect = 1.591e-59
Identity = 106/282 (37.59%), Postives = 151/282 (53.55%), Query Frame = 0
Query:  216 KLFKCNACDSTYTTKYSLNIHARIHTGDKPFKCTECDASFIRRSYLKYHMQNHTGVKLYQCTMCEMSYTSGSSLKNHLRSHTGEKPYKCTDCGEAFPRKAYLNHHQIIAHQCSMPYKCDKCDKVYKTKSSLRMHAKTHITPDENHPNQCKDCKKTFTRQHDLKRHVLSVHEKASHKCDICGTCYTAKASLVIHMRSHTGEKPFACDLCDAKFARNTYLKTHKLTHQAKKPLTCEVCGTGFTVMSSLTQHMLRHNGEKPFACDVCDAKFFRQRSVVEHRRVHT 497
            K +KC  C   +    +L  H R HTG+KP++C  C   F R S    H + HTG K Y+C  C   ++  S+L  H R HTGEKPYKC  CG+ F R + LN H  I H    PYKC++C K +   SSL++H + H       P QC +C K F+    L+ H      +  ++C+ CG  +   ++ + H   HTGEKP+ CD+C  +F + +YL+ H+  H  ++P  CE CG  F+  S L  H   H GEKP+ C+ C   F    S++ H+RVH 
Sbjct:  386 KPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRI-HTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEK---PYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSWSSYLQAHQRVHTGEKPYKCEECGKGFSWSSSLIIHQRVHA 663          
The following BLAST results are available for this feature:
BLAST of TCONS_00004962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF459.771e-7942.17Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE... [more]
back to top