TCONS_00004861-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004861-protein
Unique Name	TCONS_00004861-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	777

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004861-protein ID=TCONS_00004861-protein|Name=TCONS_00004861-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bp
MGPKKGKGGKGKLSKAEKERIKKEEAEQRAREEEEARIQAELEEREREER
EQREREERRIFEEQERARHQAEIDELNEQLAKNSNFLNVLHQKEIEKKKW
DRYMLCDGRPDPSSKKDVNTFINLTKEDHTNIDMKETLANCEMILELLEE
LKDHLNEAKLALKNDENEENILNNEKLIDSYKESTMDLQNLIFAKLDESA
FDILHTPEHAIDPDTLNISQVEESPRFKMCLWGNASRNPRVKQVEFPNDG
FTMELPKQMVLTNIATRSLYIRYDFLSSRCSTYAYKPPKPIAIPDIVEEV
DETSEKANDGEERATPFVTPLTTPQLQLPSKSALAINDKKSNNKSASKNN
LKGSTYTLSPNKGSKHPSSSRLSAKASKKKASTAALSTVEIQPEPPTDQQ
EEEKEKVIRIDDEDYVEEDVIDLRSFSPIGPLIMVELLELPHQAKEMNGW
TIQQVSNNSLQRIPYGVKTQQPSVSSINQSTVSIHSRKSDALGYNLPIAF
SFSIDDKILLHEAPQLARWDEESQHWKTSEITDIRYESEDKLMFFRTLHF
GTFALMQDIYLNMPFQTWTIRPIAMNECIFTIVGAFIEVDIVVKENLCSV
KFPEVKPQVEHIVGKWVKPQELIKMLRAVGINLFPYRDGDKYVSICKKEE
SFVDTLYQHMAVSASCCSYTWSKWNSDIGQEKVVVQACEWNSPKIPSEES
YQLYLASERICCKLKMTEYDREFSEEIFPQTQMHPGLYHMIRDGGSDEMM
RKLKETSVVFIDCVHQLLSATNVFMYS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002754	XLOC_002754	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004861	TCONS_00004861	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023247	Casc1
IPR031826	Casc1_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..175
None	No IPR available	COILS	Coil	Coil	coord: 13..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
IPR023247	Cancer susceptibility candidate protein 1	PRINTS	PR02043	CANCERSCCP1	coord: 100..125 score: 54.23 coord: 616..635 score: 41.0 coord: 254..275 score: 39.09
IPR031826	Cancer susceptibility candidate 1, N-terminal	PFAM	PF15927	Casc1_N	coord: 28..240 e-value: 3.6E-44 score: 150.8

Blast

[Close]

BLAST of TCONS_00004861-protein vs. Swiss-Prot (Human)
Match: CASC1 (Protein CASC1 OS=Homo sapiens GN=CASC1 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 5.625e-83
Identity = 223/780 (28.59%), Postives = 375/780 (48.08%), Query Frame = 0

Query:   10 KGKLSKAEKERIKKEEAEQRAREEEEARIQAELEEREREEREQREREERRIFEEQERARHQAEIDELN---------EQLAKNSNFLNVLHQKEIEKKKWDRYMLCDGRPDPSSKKDVNTFINLTKEDHTNIDMKETLANCEMILELLEELKDHLNEAKLALKNDENEENILNNEKLIDSYKESTMDLQNLIFAKLDESAFDILHTPEHAIDPDTLNISQVEESPRFKMCLWGNASRNPRVKQVEFPNDGFTMELPKQMVLTNIATRSLYIRYDFLSSRCSTYAYKPPKPIAIPDIVEEVDETSEKANDGEERATPFVTPLTTPQLQLPSKSALAINDKKSNNKSASKNNLKGSTYTLSPNKGSKHPSSSRLSAKASKKKASTAALSTVEIQPEPPTDQQEEEKEKVIRIDDEDYVEEDVIDLRSFSPIGPLIMVELLELPHQAKEMNGWTIQQVSNNSLQRIPYGVKTQQPSVSSINQSTVSIHSRKSDALGYNLPIAFSFSIDDKILLHEAPQLARWDEESQHWKTSEITDIRYESEDKLMFFRTLHFGTFALMQDIYLNMPFQTWTIRPIAMNECIFTIVGAFIEVDIVVKENLC---SVKFPEVKPQVEHIVGKWVKPQELIKMLRAVGINLFPYRDGDKYVSICKKEESFVDTLYQHMAVSASCCSYTWSKWNSDIGQEKVVVQACEWNSPKIPSEESYQLYLASERICCKLKMTEYDREFSEEIFPQTQMHPGLYHMIRDGGSDEMMRKLKETSVVFIDCVHQLLSATNVFMYS 777
            K K++KAE+ ++ +EE E+R +EEEEAR++ E EE ER E ++ E+E+    E ++  R   E++EL          E+L + +  L+          +W  Y+ CDG PDPS  +++NTFI+L KE  TN   +E +   +++L L+E+LK  L E       D+N          I  Y+ES + LQ L+  K   +   +L       D D+ N+ +V +     + +W N  +NPR + V F       E+P+ +  ++IA R L+  YD +S+             A+ ++V++  +  EKA   E         +     Q    S L   ++    +      +K S    S  + S+     R   K   +  S A L  VE   E P                 D+ E++V+DL  F+ +G +  +++LELP Q K + GW I ++    LQ+  Y      P  ++    T +             PI  +  + + ++  E P + RWD E +HW+T  I+++ Y+ +++L+ F    FG   L+QD ++NMP+Q+W +RP+ +N+ + T+   F E+ I +KENLC   S+K  + K  +  + G W+ P   I  L+  G+N+FP R    YV I  K        Y+ MA+ +S  ++ WSKWN      KVV +  E  +       ++ L + S     +LK+ E    FSE +  +T+ H  LYHM++D  S+E M K++ ++  F++ V  +L +T +  YS
Sbjct:    6 KKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLERRNEELEELYLLERCFPEAEKLKQETKLLS----------QWKHYIQCDGSPDPSVAQEMNTFISLWKEK-TNETFEEVIEKSKVVLNLIEKLKFILLETPPCDLQDKN----------IIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDENVTLYVWANLKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYTSAVTELVKDDVKNVEKAISKE---------VEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMS----SAEEESEAIKCER-EMKVLSETVSAAQLLLVENSSEKP-----------------DFFEDNVVDLCQFTTLGGVYHLDILELPPQCKPVKGWMIVEILKEGLQKYTY------PPETTEEFETENAFP----------PIEVTLEVHENVIFFEDPVVVRWDAEGKHWRTDGISNVSYKPKERLVTFSLDTFGPVTLIQDAHINMPYQSWELRPLDVNKVLLTVTTVFTEIQIQIKENLCMLSSIKLKD-KKHISILEGTWMTPIPFIIALKEAGLNIFPTRHSHFYVIINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVFKVREHLTEACTENPNWALLMFSGDRAQRLKIKEESEAFSEALKEETEFHSTLYHMVKDFASEEAMEKVRSSNCQFVNSVCHMLLSTRLLSYS 716

The following BLAST results are available for this feature:

BLAST of TCONS_00004861-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004861-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CASC1	5.625e-83	28.59	Protein CASC1 OS=Homo sapiens GN=CASC1 PE=2 SV=2	[more]

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TCONS_00004861-protein (polypeptide) - C. hemisphaerica