TCONS_00004847-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004847-protein
Unique NameTCONS_00004847-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004847-protein ID=TCONS_00004847-protein|Name=TCONS_00004847-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MYQRNTVLFLPLVFCTMIGGIFGGGLRPGSDEHHKAFLGKLKDEYDHLSV
EESVRRLRLLAPHIDMNKDGFISSKELQIWVRDKYTSILDSEDIDFKFRE
LDIHFDNSLTWDEYTERYYGLNNTASDGLSKEIKESFKEYLARDQRRWKY
ADIDEDGALNLEEFHMFSKPTKYAEMVDVVAYEEIEHYDINKDGFLSLEE
YLKAIAMPAMRPLDEKKFHEEYDLDKDGRLNKDEVKLWKTPKFFDQAELE
AKELIRIADDDQDGKLTVKEIVHNHFVFVGSKATISGTMLHDEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002746XLOC_002746Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004847TCONS_00004847Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 143..171
e-value: 29.0
score: 5.9
coord: 214..242
e-value: 130.0
score: 0.6
coord: 250..282
e-value: 20.0
score: 7.3
coord: 56..84
e-value: 8.1
score: 10.4
coord: 180..208
e-value: 1.1
score: 17.3
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 189..201
e-value: 0.11
score: 12.0
coord: 64..78
e-value: 0.001
score: 18.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 216..245
score: 7.149
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 176..211
score: 8.349
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 89..124
score: 6.535
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 52..87
score: 8.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 139..174
score: 7.874
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 246..281
score: 8.321
NoneNo IPR availableGENE3D1.10.238.10coord: 228..278
e-value: 5.0E-7
score: 29.0
NoneNo IPR availableGENE3D1.10.238.10coord: 79..104
e-value: 5.0E-4
score: 19.4
coord: 165..198
e-value: 2.3E-5
score: 23.7
NoneNo IPR availableGENE3D1.10.238.10coord: 199..227
e-value: 1.4E-5
score: 24.4
NoneNo IPR availableGENE3D1.10.238.10coord: 30..78
e-value: 0.094
score: 12.3
coord: 105..164
e-value: 3.8E-5
score: 23.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 223..235
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 259..271
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 152..164
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 65..77
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 189..201
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 43..167
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 140..291

Blast
[Close]
BLAST of TCONS_00004847-protein vs. Swiss-Prot (Human)
Match: CALU (Calumenin OS=Homo sapiens GN=CALU PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.151e-42
Identity = 100/274 (36.50%), Postives = 154/274 (56.20%), Query Frame = 0 
Query:   34 HKAFLGKLKDE-YDHLSVEESVRRLRLLAPHIDMNKDGFISSKELQIWVRDKYTSILDSEDIDFKFRELDIHFDNSLTWDEYTERYYGL---NNTASDGLSKEIKESFKEYLARDQRRWKYADIDEDGALNLEEFHMFSKPTKYAEMVDVVAYEEIEHYDINKDGFLSLEEYLKAIAM-------PAMRPLDEKKFHEEYDLDKDGRLNKDEVKLWKTPKFFDQAELEAKELIRIADDDQDGKLTVKEIVHNHFVFVGSKATISGTML--HDEF 294
            H AFLG  + + +D L+ EES  RL  +   ID +KDGF++  EL+ W++      +  ED++ +++  D++ D  ++W+EY    YG    +    DG +      +K+ + RD+RR+K AD D D     EEF  F  P +Y  M D+V  E +E  D N DGF+ LEEY+  +         P     + ++F E  D ++DG+++K+E K W  P  +D AE EA+ L+  +D ++DGKLT +EIV  + +FVGS+AT  G  L  HDEF
Sbjct:   49 HDAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWI-YEDVERQWKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFN------YKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
The following BLAST results are available for this feature:
BLAST of TCONS_00004847-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALU1.151e-4236.50Calumenin OS=Homo sapiens GN=CALU PE=1 SV=2[more]
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