TCONS_00004789-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004789-protein
Unique Name	TCONS_00004789-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	555

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004789-protein ID=TCONS_00004789-protein|Name=TCONS_00004789-protein|organism=Clytia hemisphaerica|type=polypeptide|length=555bp
MSQQKYKQFTNDSSKDQFYFSDSNGKHLATPNSKNDNIVQEAQPVFIQDS
RYSEMGEVLTKTSPELTQPIKCELNEGGVIPNWLQGSFLRLGPGKFEWGN
TAYKHVFDGDCLIHKFQIKNGHVYYSNRFLESDFHKKNAKYNRISTMGFG
TWAPPDPCSNIFKRMFLYFIPALKNDNCNVKPINVKDNEIWASTETPWIL
QLDKDTLKTLRSENAMDSVGIGAQGWLAHPHYDSEGNLYNFSVKQKPTCR
YDVIKIPMRPGSTEKEPFKGAEIVASIPTSQSLSAYYHSFGMTDNYFILF
ENPFYIKSVFAVMTMNIFKKSFLDILKWKPEYGTLIRVIDRKTGKEMRRI
KVNPVFVFHHVNAYEENGDIIVDVAAYPDASIVSALYLKQLREGHKGEWV
KLPNLYRYRLPITQLQDTTADVLDLPTDKTGRDYECIAADFEMPTINYEM
CNGKPYRYTYGVDTPFGHFISKVDVQNKTKVNWYPGENYSVSEGYFIAKP
GAKLEDDGVVVSSVTGVKGKPSFLVILDARTFSEIARATLPFAPALTIHG
NFVQG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002708	XLOC_002708	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004789	TCONS_00004789	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004294	Carotenoid_Oase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004294	Carotenoid oxygenase	PFAM	PF03055	RPE65	coord: 62..554 e-value: 3.6E-96 score: 322.8

Blast

[Close]

BLAST of TCONS_00004789-protein vs. Swiss-Prot (Human)
Match: BCDO1 (Beta,beta-carotene 15,15'-dioxygenase OS=Homo sapiens GN=BCO1 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 7.012e-93
Identity = 183/527 (34.72%), Postives = 281/527 (53.32%), Query Frame = 0

Query:   55 MGEVLTKTSPELTQPIKCELNEGGVIPNWLQGSFLRLGPGKFEWGNTAYKHVFDGDCLIHKFQIKNGHVYYSNRFLESDFHKKNAKYNRISTMGFGTWAPPDPCSNIFKRMFLYF---IPALKNDNCNVKPINVKDNEIWASTETPWILQLDKDTLKTLRSENAMDSVGIGAQGWLAHPHYDSEGNLYNF--SVKQKPTCRYDVIKIPMRPGSTEKE---PFKGAEIVASIPTSQSLS-AYYHSFGMTDNYFILFENPFYIKSVFAVMTMNIFKKSFLDILKWKPEYGTLIRVIDRKTGKEMR-RIKVNPVFVFHHVNAYEENGDIIVDVAAYPDASIVSALYLKQLREGHK--GEWVKLPNLYRYRLP------------ITQLQDTTADVLDLPTDKTGRDYECIAADFEMPTINYEMCNGKPYRYTYGVD---TPFGHFISKVDVQNKTKVNWYPGENYSVSEGYFIAKPGAKLEDDGVVVSSVTGVK-GKPSFLVILDARTFSEIARATLPFAPALTIHGNFV 553
            M  +  +   E  +P++ ++   G IP WLQG+ LR GPG    G + Y H FDG  L+H F I++G VYY +++L SD +  N + NRI    FGT A PDPC NIF + F Y    IP    DNC +  +   + + +A++ET +I +++  TL+TL   +    V +      +HPHYD  GN+ N   S+ +K   +Y + KIP      +K+   P+K  E+  SIP+   LS +YYHSFG+T+NY I  E PF +  +  + T  I + S+   L +  E  T I +ID++T + ++ +   + + VFHHVNAYEE+G I+ DV AY D S+    YL  L +  K       +P L R+ +P            + ++  TTA  L     +     E +    E+P +NY   NGK YRY +      +P    I K D+  K+ + W   + +  +E  F+  PGAK EDDGV++S++      K  FL+ILDA++F+E+ARA++     + +HG F+
Sbjct:    1 MDIIFGRNRKEQLEPVRAKVT--GKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGEVYYRSKYLRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDF-TDNCLINIMKCGE-DFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLAT--SHPHYDEAGNVLNMGTSIVEKGKTKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRL-DILKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEEDGCIVFDVIAYEDNSLYQLFYLANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLELPRVNYAH-NGKQYRYVFATGVQWSPIPTKIIKYDILTKSSLKWREDDCWP-AEPLFVPAPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDVDMHMDLHGLFI 518

The following BLAST results are available for this feature:

BLAST of TCONS_00004789-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004789-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BCDO1	7.012e-93	34.72	Beta,beta-carotene 15,15'-dioxygenase OS=Homo sapi...	[more]

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TCONS_00004789-protein (polypeptide) - C. hemisphaerica