TCONS_00004597-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004597-protein
Unique NameTCONS_00004597-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length460

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004597-protein ID=TCONS_00004597-protein|Name=TCONS_00004597-protein|organism=Clytia hemisphaerica|type=polypeptide|length=460bp
LKLQGTNISTLPGMNLLLKNVTDPSPFEYLKRLKYLDLSFNPFGGEFIVT
KDQYFSYNIPFLKVLKLKNLGLRNFSFGGYQSFDEIDISGNCFVKGGLSM
RLPSWHGIRILNASYSCLNQTFGPKYQHSNWILDLRGNNFRSAKINLAGV
QDPGSLILSHNNIEKLVLHGNTEGLTLLDLSYNALSNTENITLLGEFLIH
KLVLKGNPIETFNTRNMENVKFAALDLSDNHITEFPTNDILDSSGLIRHL
NLANNRISKIPAALNMLEKLIELNLRNNSLVSLPYGIFSDASTLKKFDLS
SNDLKCSCNLTITLNLMQNKDSIVGSCVDEKNLEQRNLTDFTNRIFEISE
DSKCNLCPIEPCNLRGECQASNETGYHCNCDDGYTGRVCEINKANCFLTH
TCGLCNDTICGKHGTCKELSPTEYKCECEYEYTGKFCRVPKCISRQECGV
CTRSWSLKRC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002591XLOC_002591Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004597TCONS_00004597Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001611Leu-rich_rpt
IPR032675L_dom-like
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 404..438
e-value: 2.2
score: 17.3
coord: 356..390
e-value: 0.018
score: 24.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 355..390
score: 13.835
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 403..438
score: 10.575
NoneNo IPR availableGENE3D2.10.25.10coord: 352..393
e-value: 2.2E-6
score: 27.0
NoneNo IPR availableGENE3D2.10.25.10coord: 402..442
e-value: 5.4E-6
score: 25.9
NoneNo IPR availableCDDcd00054EGF_CAcoord: 361..390
e-value: 0.00982089
score: 32.9938
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 352..392
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 32..46
e-value: 0.46
score: 10.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 248..304
e-value: 3.6E-7
score: 29.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 246..267
score: 7.381
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 332..355
score: 4.924
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 174..195
score: 7.273
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 221..242
score: 6.549
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 269..290
score: 6.557
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1..18
score: 4.678
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 293..314
score: 5.471
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 212..351
e-value: 1.7E-18
score: 65.9
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..135
e-value: 2.4E-8
score: 32.1
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 136..211
e-value: 5.0E-4
score: 18.9
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 20..318
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 378..389
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 378..389
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 426..437

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004597-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top