TCONS_00004541-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004541-protein
Unique NameTCONS_00004541-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004541-protein ID=TCONS_00004541-protein|Name=TCONS_00004541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MHSDGLFLTKKPTNNWNGFHLILPSVSISNVGQLAVDMLLHNLKDKVKKV
SGIYDEALLPVTGKDHNGEIFESMEVFEAENLKLVIIQQRAPFIKGRIPS
FRQRLLAWIERCQFKKVTILSSVSSHVKTDADLNESSPFRFLCNKDTIRK
ELVSKHQWIEYSVKKLLEHKGSLELPGSGIAKSLYEDSESQNIPFVVCLV
FCNHGDSRKELRVAMQHLQQYLNLEWALGELSEPSHWKIQSAYDNELMIF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002554XLOC_002554Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004541TCONS_00004541Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019151Proteasome_assmbl_chaperone_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019151Proteasome assembly chaperone 2PFAMPF09754PAC2coord: 21..233
e-value: 1.1E-22
score: 81.0

Blast
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BLAST of TCONS_00004541-protein vs. Swiss-Prot (Human)
Match: PSMG2 (Proteasome assembly chaperone 2 OS=Homo sapiens GN=PSMG2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.455e-29
Identity = 71/242 (29.34%), Postives = 136/242 (56.20%), Query Frame = 0 
Query:   18 GFHLILPSVSISNVGQLAVDMLLHNLKDKVKKVSGIYDEALLPVTGKD-------HNGEIFESMEVFEAENLKLVIIQQRAPFIKGRIPSFRQRLLAWIERCQFKKVTILSSVSSHVKTDADLNESSPFRFLCNKDTIRKELVSKHQWIEY-------SVKKLLEHKGSLELPGSGIAKSLYEDSESQNIPFVVCLVFCNHGDSRKELRVAMQHLQQYLNLEWALGE--LSEPSHWKIQSAY 243
            GF L++P+VS+ NVGQLA+D+++  L   + K+   Y + L+P+ G +       ++ E+  + EV+   + KLV +Q R+ FIK +   F ++LL+W++     +V +LSS  S+ + D  L  S+PFR+L    +++K + +K + + +        + ++ + +  + +PG GI K+LY++S S+ I   V L F + GD+  +    +++L ++L +   L +      S WKI S++
Sbjct:   14 GFTLLMPAVSVGNVGQLAMDLIISTLN--MSKIGYFYTDCLVPMVGNNPYATTEGNSTELSINAEVYSLPSRKLVALQLRSIFIKYKSKPFCEKLLSWVKSSGCARVIVLSSSHSYQRNDLQL-RSTPFRYLLTP-SMQKSVQNKIKSLNWEEMEKSRCIPEIDDSEFCIRIPGGGITKTLYDESCSKEIQMAVLLKFVSEGDNIPDALGLVEYLNEWLQILKPLSDDPTVSASRWKIPSSW 251
The following BLAST results are available for this feature:
BLAST of TCONS_00004541-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSMG22.455e-2929.34Proteasome assembly chaperone 2 OS=Homo sapiens GN... [more]
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