TCONS_00004415-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004415-protein
Unique NameTCONS_00004415-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004415-protein ID=TCONS_00004415-protein|Name=TCONS_00004415-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MSEKNEKEELQKAKENFAKEQKLMKELIVKSEEHEQSVTVKTDRIKTTGR
LYEDTITEDLHSTAGNGDIETLKFLLKKGLYVNSKDINGATPLFCACKEN
QLHAAVLLIGHGANVNSSCNEGCTPLMYAAWKGHAEIVSLLIKHQADVKA
IDDNENTALHFAALGGQQVVCLLLRKAGANKGAKNKKKKTPSDNLETFSQ
ELKVSLTSSFPMEPVHFEKSKSLFGMKRIAREFSKLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002470XLOC_002470Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004415TCONS_00004415Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..30
NoneNo IPR availableCDDcd00204ANKcoord: 60..174
e-value: 7.33154E-33
score: 116.329
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 121..150
e-value: 3.2E-6
score: 36.7
coord: 154..183
e-value: 5.4
score: 16.0
coord: 88..117
e-value: 2.0E-4
score: 30.7
coord: 55..84
e-value: 620.0
score: 6.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 154..185
e-value: 7.5E-4
score: 19.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..120
score: 9.938
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 121..153
score: 12.903
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 154..186
score: 9.137
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 60..150
e-value: 7.2E-18
score: 64.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 2..133
e-value: 2.5E-27
score: 94.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 134..206
e-value: 2.9E-21
score: 75.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 60..191
score: 36.074
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 60..193

Blast
[Close]
BLAST of TCONS_00004415-protein vs. Swiss-Prot (Human)
Match: ANK3 (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 2.425e-22
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 0 
Query:   54 DTITED----LHSTAGNGDIETLKFLLKKGLYVNSKDINGATPLFCACKENQLHAAVLLIGHGANVNSSCNEGCTPLMYAAWKGHAEIVSLLIKHQADVKAIDDNENTALHFAALGGQQVVCLLLRKAGANKGAKNKKKKTP 191
            D +T D    LH  A  G  +  K LL K    N+K +NG TPL  ACK+N++    LL+ HGA++ +    G TP+  AA+ GH  IVS L+ H A     +    TALH AA  GQ  V   L + GA   AK K  +TP
Sbjct:  361 DDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTP 502
The following BLAST results are available for this feature:
BLAST of TCONS_00004415-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK32.425e-2240.14Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
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