TCONS_00004345-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004345-protein
Unique NameTCONS_00004345-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004345-protein ID=TCONS_00004345-protein|Name=TCONS_00004345-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
HVLDSNHVNIISEIIERTMISKPLILLFILINASLQHTWHGRPSVFQKPQ
FARYIISNADWGVVSAYSEIYKQPFGTLQSFADGPLDHSTGIPYFYISQW
STTWKNIDVNSTVSLTVSEAESDYCEAHNLDPMEPICGRIMLTGAIVPVT
DANELAFAKAAMFTRHPAMKEWPTKHHWTFMKLNLTSVNVLSFYGGISDV
TLADYFNAKPSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002425XLOC_002425Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004345TCONS_00004345Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012349Split_barrel_FMN-bd
Vocabulary: Molecular Function
TermDefinition
GO:0048037cofactor binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0048037 cofactor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012349FMN-binding split barrelGENE3D2.30.110.10coord: 47..211
e-value: 6.4E-23
score: 80.9
IPR012349FMN-binding split barrelSUPERFAMILY50475FMN-binding split barrelcoord: 49..208
NoneNo IPR availablePFAMPF13883Pyrid_oxidase_2coord: 47..207
e-value: 1.0E-43
score: 149.1

Blast
[Close]
BLAST of TCONS_00004345-protein vs. Swiss-Prot (Human)
Match: CREG1 (Protein CREG1 OS=Homo sapiens GN=CREG1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.920e-39
Identity = 60/161 (37.27%), Postives = 98/161 (60.87%), Query Frame = 0 
Query:   50 QFARYIISNADWGV---VSAYSEIYKQPFGTLQSFADGPLDHSTGIPYFYISQWSTTWKNIDVNSTVSLTVSEAESDYCEAHNLDPMEPICGRIMLTGAIVPVTDANELAFAKAAMFTRHPAMKEWPTKHHWTFMKLNLTSVNVLSFYGGISDVTLADYFN 207
            + AR++   +DWG    +S    +  +PF  + S +DGP    +G+PYFY+S    +  N+  N   +LT++ A++++C+ H  DP  P+C  IML+G +  V +  E+  AK ++F RHP MK WP+ H+W F KLN+T++ VL ++GG   VT  +Y+N
Sbjct:   57 RVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNE-TEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYN 216
The following BLAST results are available for this feature:
BLAST of TCONS_00004345-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CREG12.920e-3937.27Protein CREG1 OS=Homo sapiens GN=CREG1 PE=1 SV=1[more]
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