TCONS_00004306-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004306-protein
Unique NameTCONS_00004306-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length616

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004306-protein ID=TCONS_00004306-protein|Name=TCONS_00004306-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MPKFQVSSCTVEKLDGEDIIIDIKNLHNGQELLDEVCKTIGLEESPYFGL
RYNHPKDDQVSWFDASKPLKRQLQKASHKFKFGVQFYPSNIHELKNEFTR
YQFVLQARENFLTAYWSCSLPTQALLASYVAQAEFGDYDSMVHNKDYLND
LCVMQNQSEEFLEKVNYFHQKHTNLSKVDVDWLYLENSQKTALFGMEAYD
IWDSDQNLMKFGLSSSGIHILHMNTVLHTFLWPTVMKCHFKKNEIFIKLK
VGEKTVRVVFIASSATEAKRIVTSCMFIKYFALNGKRKVVQYKKKKPSPT
SGNQQQPPSSDVCPHNVDEDEPETPPFKRVDSKRFSKRFLPKTESLSIDL
PADDSDSIIANREERHHSIKEDLDEKSTGRPSENEEQSPVGSPEHDTGDV
YLGYPNNIQVPTITQTAPSENSLDKLDTEEEEDEKALEMEKQEPTEDTPP
KVDGPETPKTVDDVTITEQKDDVIADEENVEIIEVVDIDYVENEEHAGAI
EKGDANTTKTEEVTTKVVEIRIVTSENDKLFDNADKKDVGNGDLKVILAD
GAESARSNQEVMIVYGEETLESLEGSLEAHKINRGSTLLESIEKVLSESF
EIVKEEDSFAVENEEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002389XLOC_002389Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004306TCONS_00004306Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019749Band_41_domain
IPR018980FERM_PH-like_C
IPR018979FERM_N
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR019748FERM_central
IPR011993PH_dom-like
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 423..443
NoneNo IPR availableCOILSCoilCoilcoord: 611..616
NoneNo IPR availableGENE3D3.10.20.90coord: 6..85
e-value: 3.7E-17
score: 61.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..332
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 105..118
score: 30.8
coord: 179..195
score: 24.26
coord: 40..52
score: 54.33
coord: 118..138
score: 52.48
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 3..199
e-value: 9.5E-32
score: 121.5
IPR018980FERM, C-terminal PH-like domainSMARTSM01196FERM_C_3coord: 203..290
e-value: 0.0061
score: 23.0
IPR018980FERM, C-terminal PH-like domainPFAMPF09380FERM_Ccoord: 205..281
e-value: 1.9E-6
score: 28.1
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 14..74
e-value: 7.8E-14
score: 51.3
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 86..190
e-value: 2.2E-22
score: 79.0
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 92..199
e-value: 5.9E-10
score: 39.5
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 99..190
e-value: 2.75466E-15
score: 71.1234
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 90..192
IPR011993PH domain-likeGENE3D2.30.29.30coord: 194..281
e-value: 5.6E-10
score: 39.2
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 193..281
IPR000299FERM domainPROSITEPS50057FERM_3coord: 7..286
score: 52.609
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 8..88

Blast
[Close]
BLAST of TCONS_00004306-protein vs. Swiss-Prot (Human)
Match: E41L3 (Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.107e-46
Identity = 82/245 (33.47%), Postives = 139/245 (56.73%), Query Frame = 0 
Query:    9 CTVEKLDGEDIIIDIKNLHNGQELLDEVCKTIGLEESPYFGLRYNHPKDDQVSWFDASKPLKRQLQKASHKFKFGVQFYPSNIHELKNEFTRYQFVLQARENFLTAYWSCSLPTQALLASYVAQAEFGDYDSMVHNKDYLNDLCVMQNQSEEFLEKVNYFHQKHTNLSKVDVDWLYLENSQKTALFGMEAYDIWDSDQNLMKFGLSSSGIHILHMNTVLHTFLWPTVMKCHFKKNEIFIKLKVGE 253
            C V  LDG +   D++    GQ L D+VC+ + L E  YFGL Y    ++Q +W D +K +K+Q++  +  F F V+FYP +  +L  + TRY   LQ R++ ++    CS  T ALL SY  Q+E GDYD      DY+++     N ++E  +KV   H+ H  ++  + +  +LEN++K +++G++ +   DS+   +  G+ +SG+ I      ++ F WP V+K  +K+N  +IK++ GE
Sbjct:  112 CKVILLDGSEYTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRD-AENQKNWLDPAKEIKKQVRSGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGSDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGE 355
The following BLAST results are available for this feature:
BLAST of TCONS_00004306-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L31.107e-4633.47Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3... [more]
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